Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Hube, D., Bill, J., Knop, E. S. et al. 2023. Physical injuries and hair corticosterone concentration in rabbit kits from single- and group-housed does kept on a commercial farm. Animals 13(2), 196.

In intense breeding programs, rabbits are exposed to numerous stress factors which could affect their welfare and health. It has been suggested that group housing is more comfortable for does and similar to the living...

Vicentini, R. R., El Faro, L., Ujita, A. et al. 2023. Effects of training for first milking involving positive tactile stimulation on post-calving maternal behaviors in primiparous gyr dairy cows. Animals 13(5), 921.

In dairy systems with Zebu breeds, calves are not immediately separated from their dams after calving; consequently, maternal care and protective behavior are important, influencing both productive performance and stockpeople’s safety. Our objectives were to...

Machado, M., Freitas Silveira, R. M., Machado Bittar, C. M. et al. 2023. Can the emotional state of calves be noticed by their facial expression and heart rate? Applied Animal Behaviour Science 260, 105874.

The aim of this study was to identify whether or not dairy calves change their facial expression and heart rate according to their emotional state when subjected to a stroking or umbrella stimulus. Thirty-two mixed-breed...

Luisi, B., Micheletta, J., Julle-Danière, E. et al. 2023. Monkeying around: Non-human primate behavioural responses to humans reproducing their facial expressions. Applied Animal Behaviour Science 265, 105990.

People are often observed mimicking animals’ facial expressions in an attempt to communicate with them. However, to date, there is limited understanding of how animals respond to humans reproducing their facial displays, or if this...

Lecorps, B., Woodroffe, R. E., von Keyserlingk, M. A. G. et al. 2023. Hunger affects cognitive performance of dairy calves. Biology Letters 19(1), 20220475.

Hunger remains a significant animal welfare concern as restricted feeding practices are common on farms. Studies to date have focused on negative effects on health and productivity but little research has addressed the feeling of...

Clark, F. E. 2023. In the zone: Towards a comparative study of flow state in primates. Animal Behavior and Cognition 10(1), 62–88.

Flow is an altered state of feeling ‘in the zone’ when fully absorbed in a challenge and is associated with positive affective state (feelings). Despite almost five decades of research, Flow has not yet been...

Ospina Rios, S. L., Lee, C., Andrewartha, S. J. et al. 2023. A pilot study on the feasibility of an extended suckling system for pasture-based dairies. Animals 13(16), 2571.

This study investigated cow-calf productivity in a 10-week, pasture-based, extended suckling system featuring part-time cow-calf contact and once-a-day milking. A total of 30 dairy cows and their calves were assigned to two treatments: (1) cow...

González-de-la-Vara, M., De Anda, F., Romano, M. C. 2023. Dead newborn calf affects behavior, cortisol, milk production, and reproductive performance in primiparous dairy cows. Journal of Veterinary Behavior 66, 20–28.

Little is known about the long-term effects of stillbirth on dairy cows. This study compared the behavior, serum and hair cortisol concentrations, production and quality of milk, and reproductive performance in primiparous dairy cows that...

Haertel, A. J., Beisner, B. A., Buehler, M. S. et al. 2023. The impact of housing on birth outcomes in breeding macaque groups across multiple research centers. American Journal of Primatology 85(11), e23554.

Demand for nonhuman primates in research has increased over the past several years, while nonhuman primate supply remains a challenge in the United States. Global nonhuman primate supply issues make it increasingly important to maximize...

Uddin, J., McNeill, D. M., Phillips, C. J. C. 2023. Measuring emotions in dairy cows: Relationships between infrared temperature of key body parts, lateralised behaviour and milk production. Applied Animal Behaviour Science 269, 106115.

The emotions of cows could be reflected in their body temperature, productivity and behaviours. We tested whether there is a positive correlation between non-invasive infrared temperature (IRT) and right-side laterality (presumed to indicate anxiety), and...

Wenker, M. L., van Reenen, C. G., Bokkers, E. A. M. et al. 2022. Comparing gradual debonding strategies after prolonged cow-calf contact: Stress responses, performance, and health of dairy cow and calf. Applied Animal Behaviour Science 253, 105694.

We assessed effects of two-step debonding strategies in calf rearing systems with different types of prolonged cow-calf contact (CCC) on stress responses, health and performance of dairy cows and calves. Forty-eight Holstein Friesian cow-calf pairs...

Schnaider, M. A., Heidemann, M. S., Silva, A. H. P. et al. 2022. Vocalization and other behaviors as indicators of emotional valence: The case of cow-calf separation and reunion in beef cattle. Journal of Veterinary Behavior 49, 28-35.

Vocalization may communicate the emotional state in vocal animals. We aimed to describe and compare vocalization and other behavioral signs of cow-calf pairs in emotionally negative and positive situations, and the potential influence of genetic...

Schnaider, M. A., Heidemann, M. S., Silva, A. H. P. et al. 2022. Cat vocalization in aversive and pleasant situations. Journal of Veterinary Behavior 55-56, 71-78.

Vocalization may transmit information from the emitting animal, including information about his or her emotional state. This study aimed to compare the vocal and the behavioral responses of domestic cats during an aversive and a...

Webb, L. E., Marcato, F., Bokkers, E. a. M. et al. 2022. Impact of early dam contact on veal calf welfare. Scientific Reports 12(1), 22144.

Dairy calves, including surplus calves, are typically separated from their dam within hours of birth. The aim of this study was to assess the welfare impacts of raising surplus calves destined for veal with their...

Wells, D. L. 2021. Paw preference as a tool for assessing emotional functioning and welfare in dogs and cats: A review. Applied Animal Behaviour Science 236, 105148.

Dogs and cats have been extensively studied of late in relation to their paw preferences, with both species showing preferential motor bias at the level of the individual. Over the years, a wide range of...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

de Souza Teixeira, O., Kuczynski da Rocha, M., Mendes Paizano Alforma, A. et al. 2021. Behavioural and physiological responses of male and female beef cattle to weaning at 30, 75 or 180 days of age. Applied Animal Behaviour Science 240, 105339.

Weaning calves at a young age can generate great stress, but it is widely practiced in the industry despite that. So, to what extend weaning in early ages is more stressful than at later ones...

Travain, T., Valsecchi, P. 2021. Infrared thermography in the study of animals’ emotional responses: A critical review. Animals 11(9), 2510.

Whether animals have emotions was historically a long-lasting question but, today, nobody disputes that they do. However, how to assess them and how to guarantee animals their welfare have become important research topics in the...

Wenker, M. L., van Reenen, C. G., de Oliveira, D. et al. 2021. Calf-directed affiliative behaviour of dairy cows in two types of cow-calf contact systems. Applied Animal Behaviour Science 243, 105461.

There is an interest in alternative rearing systems that allow for prolonged cow-calf contact (CCC). Yet, a better understanding of cows’ affiliative behaviour in those systems is needed. We evaluated the effect of type of...

MacLellan, A., Fureix, C., Polanco, A. et al. 2021. Can animals develop depression? An overview and assessment of “depression-like” states. Behaviour 158(14/15), 1303–1353.

Describing certain animal behaviours as 'depression-like' or 'depressive' has become common across several fields of research. These typically involve unusually low activity or unresponsiveness and/or reduced interest in pleasure (anhedonia). While the term 'depression-like' carefully...

Campbell, D. L. M., Lee, C. 2021. A perspective on strategic enrichment for brain development: Is this the key to animal happiness? Frontiers in Veterinary Science 8, 720422.

Livestock animals are sentient beings with cognitive and emotional capacities and their brain development, similar to humans and other animal species, is affected by their surrounding environmental conditions. Current intensive production systems, through the restrictions...

Kidd, P., Rose, P. 2021. Influences of rearing environment on behaviour and welfare of captive Chilean flamingos: A case study on foster-reared and parent-reared birds. Journal of Zoological and Botanical Gardens 2(2), 174–206.

Behaviour signals the internal states that relate to an individual’s welfare and its development is influenced by the early social environment that an animal experiences. Husbandry practices can alter this early social environment, for example...

Li, C., Wang, J., Jin, S. et al. 2020. Artificial grooming during early life could boost the activity and human affinity of Holstein female calves. Animals 10(2), 302.

Early cow–calf separation management induced various welfare problems for dairy calves. We mimicked the maternal licking by manually brushing right after the Holstein female calves were born and during their first week of life, termed...

Bertho, J.-M., Ancelet, S., Denais-Laliève, D. et al. 2020. Humane endpoints in severe irradiation experiments using non-human primates: A retrospective analysis. Scandinavian Journal of Laboratory Animal Science 46(1).

A retrospective statistical study has been performed in order to identify the biological, clinical and behavioural variables that could potentially predict the survival status of irradiated non-human primates (NHP) and to refine the future use...

Brown, M. E., Torkelson, M. R., Olsen, G. H. et al. 2020. Comparison of fecal glucocorticoid metabolite concentrations in hand‐ versus parent‐reared whooping cranes (Grus americana). Zoo Biology 39(4), 276–280.

Endangered whooping cranes (Grus americana ) have been produced in captivity for reintroduction programs since the 1980s, using techniques such as artificial insemination, multiple clutching, and captive‐rearing to speed recovery efforts. Chicks are often hand‐reared...