Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Zemanova, M. A. 2021. Noninvasive genetic assessment is an effective wildlife research tool when compared with other approaches. Genes 12(11), 1672.

Wildlife research has been indispensable for increasing our insight into ecosystem functioning as well as for designing effective conservation measures under the currently high rates of biodiversity loss. Genetic and genomic analyses might be able...

Nash, R., Johnston, H., Robbins, A. et al. 2021. The effect of enrichment filling and engagement time on regurgitation and reingestion behaviour in three zoo-housed orangutans. Journal of Zoological and Botanical Gardens 2(1), 10–20.

Regurgitation and reingestion (R/R) is a prevalent, abnormal behaviour observed in captive great apes. R/R may be related to animal welfare and while less R/R appears to occur when apes are provided with browse and...

Acaralp-Rehnberg, L. K., Coleman, G. J., Magrath, M. J. L. et al. 2020. The effect of behind-the-scenes encounters and interactive presentations on the welfare of captive servals (Leptailurus serval). Animals 10(4), 743.

The serval (Leptailurus serval) is a small African felid that is well represented in zoos and often serves as an animal ambassador in encounter programs with zoo visitors. The impact on serval welfare in relation...

Łapiński, S., Orel, J., Niedbała, P. et al. 2020. Infrared thermography as an indicator of heat loss in fur-chewing chinchillas (Chinchilla lanigera). Journal of Applied Animal Welfare Science 23(3), 338-347.

Fur-chewing is a common problem in chinchilla (Chinchilla lanigera). It may affect the welfare of animals due to heat loss, thereby possibly impacting food and water intake to maintain body temperature. In this context, infrared...

Skidmore, T., Roe, E. 2020. A semi-structured questionnaire survey of laboratory animal rehoming practice across 41 UK animal research facilities. PLOS ONE 15(6): e0234922.

If a laboratory animal survives an experiment without lasting compromised welfare, its future must be negotiated. Rehoming may be a consideration. This paper reports on research findings that provide an indication of the uptake of...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Munari, C., Ponzio, P., Macchi, E. et al. 2020. A multifactorial evaluation of different reproductive rhythms and housing systems for improving welfare in rabbit does. Applied Animal Behaviour Science 230, 105047.

The most widespread reproductive rhythm practiced in rabbit farming is based on artificial insemination (AI) performed at around 11 days pospartum. This approach results in high production rates, but requires high yearly replacement of animals...

Nagy-Reis, M. B., Mendonça-Furtado, O., Resende, B. 2019. Do social factors related to allostatic load affect stereotypy susceptibility? Management implications for captive social animals. Animal Welfare 28(2), 183-190.

Stereotypies are frequently associated with sub-optimal captive environments and are used as welfare indicators. However, susceptibility to stereotypy can vary across individuals of the same group. As such, identifying which individuals are more susceptible to...

Wallace, E. K., Herrelko, E. S., Koski, S. E. et al. 2019. Exploration of potential triggers for self-directed behaviours and regurgitation and reingestion in zoo-housed chimpanzees. Applied Animal Behaviour Science 221, 104878.

The unique challenges faced by animals living in zoos can lead to the production of anxiety-related behaviours. In this study we aimed to understand what specific factors may cause chimpanzees to display these behaviours. In...

Kroeker, R., Chichester, L., Lee, G. H. et al. 2019. Effects of pregnancy, outdoor access, and antifungal medication on hair loss in breeding-age female pigtailed macaques (Macaca nemestrina). Comparative Medicine 69(3), 221–227.

Over 18 mo, adult female pigtailed macaques (Macaca nemestrina) housed at a breeding facility in Arizona were monitored every 6 mo for alopecia. The study period coincided with the movement of a majority of animals...

Bloomsmith, M. A., Clay, A. W., Lambeth, S. P. et al. 2019. Survey of behavioral indices of welfare in research chimpanzees (Pan troglodytes) in the United States. JAALAS 58(2), 160-177.

Chimpanzees demand specialized housing and care and the highest degree of attention to animal welfare. The current project used a survey method to collate information on chimpanzee housing and behavioral indices of welfare across all...

Animal Welfare Institute. 2019. A new beginning for retired laboratory rabbits. Animal Welfare Institute (AWI) Quarterly 68(4) Winter, 10-11.

This article describes the rehoming of 10 laboratory female rabbits now living as a group in a private shelter.

National Academies of Sciences, Engineering, and Medicine. 2019. Care, Use, and Welfare of Marmosets as Animal Models for Gene Editing-Based Biomedical Research: Proceedings of a Workshop. The National Academies Press: Washington, DC, 122 pp.

The marmoset, a type of small monkey native to South America, is a research model of increasing importance for biomedical research in the United States and globally. Marmosets offer a range of advantages as animal...

Broom, D. M. 2019. Abnormal behavior and the self-regulation of motivational state. Journal of Veterinary Behavior 29, 1-3.

Although most abnormal behaviors, including all stereotypies, indicate poor welfare, some that occur in rare situations are functional and do not indicate a negative situation. There is a wide range of abnormal behaviors that occur...

Marinath, L., Vaz, J., Kumar, D. et al. 2019. Drivers of stereotypic behaviour and physiological stress among captive jungle cat (Felis chaus Schreber, 1777) in India. Physiology & Behavior 210, 112651.

Zoos play a vital role in managing and conserving a wide range of threatened species and in enhancing their populations in natural habitats through captive breeding and reintroduction programmes. Most small felids are poor breeders...

Brand, C. M., Marchant, L. F. 2019. Social hair plucking is a grooming convention in a group of captive bonobos (Pan paniscus). Primates 60(6), 487–491.

Hair plucking is observed in many captive primate species and is often characterized as an abnormal behavior. However, this behavior may be both self-directed and social and may have different etiologies. Early research in captive...

Poirier, C., Oliver, C. J., Castellano Bueno, J. et al. 2019. Pacing behaviour in laboratory macaques is an unreliable indicator of acute stress. Scientific Reports 9, 7476.

Pacing behaviour, the most frequent stereotypic behaviour displayed by laboratory rhesus macaques (Macaca mulatta) is often used as an indicator of stress. In this study, we investigated how reliable this welfare indicator is at detecting...

Broom, D. M., Johnson, K. G. 2019. Stress and Animal Welfare: Key Issues in the Biology of Humans and Other Animals (2nd ed). Springer, Berlin, Germany.

This is the Second Edition of a well-received book that reflects a fresh, integrated coverage of the concepts and scientific measurement of stress and welfare of animals including humans. This book explains the basic biological...

McMillan, F. D. (ed). 2019. Mental Health and Well-being in Animals (2nd ed). CABI, Wallingford, UK.

This second edition is fully revised, expanded, and comprehensively updated with the most current knowledge about the full array of mental health issues seen in animals. Written by key opinion leaders, internationally-recognized experts and specialists...

Shelton, K. A., Nehete, B. P., Chitta, S. et al. 2019. Effects of transportation and relocation on immunologic measures in cynomolgus macaques (Macaca fascicularis). JAALAS 58(6), 774–782.

NHP are a small, but critical, portion of the animals studied in research laboratories. Many NHP are imported or raised at one facility and subsequently moved to another facility for research purposes. To improve our...

Schiffmann, C., Clauss, M. 2019. Impact of a new exhibit on stereotypic behavior in an elderly captive African elephant. Journal of Zoo and Aquarium Research 7(1), 37-43.

Stereotypic behavior in zoo elephants is considered an indicator of impaired welfare. The underlying causes are diverse and many aspects are still unexplored. Nevertheless, many zoological institutions take huge efforts to improve the well-being of...

Gomes, D., McSweeney, L., Santos, M. 2019. Effects of environmental enrichment techniques on stereotypical behaviours of captive Sumatran tigers: A preliminary case study. Journal of Animal Behaviour and Biometeorology 7(4), 144-148.

Wild animals are maintained in Zoological facilities for purposes of education, conservation, research, and recreation. Several studies have proven that the surroundings of an animal's artificial habitat, as well as environmental enrichment techniques, are factors...

Peric, T., Comin, A., Corazzin, M., et al. 2018. Hair cortisol concentrations in New Zealand white rabbits subjected to surgery. Animal Welfare 27(1), 13-20.

The aim of this study was to assess hair cortisol concentrations in New Zealand white rabbits (Oryctolagus cuniculus) that were subjected to relocation and surgery to evaluate HPA-axis activity; in addition, we used this marker...

Leeds, A., Lukas, K. E. 2018. Experimentally evaluating the function of self-directed behaviour in two adult mandrills (Mandrillus sphinx). Animal Welfare 27(1), 81-86.

Given the difficulties of conducting regular endocrine and veterinary assessments of animals, behavioural observations are often the most commonly used tool to assess the welfare of animals in human care. Behavioural measures, inexpensive and convenient...

Costa, R., Sousa, C., Llorente, M. 2018. Assessment of environmental enrichment for different primate species under low budget: A case study. Journal of Applied Animal Welfare Science 21(2), 185-199.

The 2011 European Union Zoo Inquiry presented evidence that most zoos fail to achieve adequate levels of nonhuman animal welfare. Appropriate environmental enrichment (EE) can play a role in the promotion of welfare. However, financial...