Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Hoglund, E., Calabrese, S., Jonassen, T. M. et al. 2024. Does sedation with AQUI-S mitigate transport stress and post transport mortality in ballan wrasse (Labrus bergyltae)? Frontiers in Veterinary Science 11.

Ballan wrasse (Labrus bergylta) are commonly used as cleaner fish in salmon farms as a biological treatment to mitigate sea lice infestation. Improved welfare for cleaner fish both during production of these fish and when...

Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Bellini, L., Schrank, M., Veladiano, I. A. et al. 2023. Retrospective comparison of the effects of laryngeal mask and endotracheal tube on some cardio-respiratory variables in pet rabbits undergoing anaesthesia for elective gonadectomy. Acta Veterinaria Scandinavica 65(1), 10.

Endotracheal intubation in rabbits is challenging and supraglottic airway devices, such as laryngeal masks (LMA), represent an alternative as they are easy to insert, and do not stimulate the larynx requiring therefore a lighter plane...

Higham, J. P., Cooper, E. B., Whalen, C. et al. 2023. Urinary cytokine measurements do not reflect surgery-induced inflammation in rhesus macaques. American Journal of Primatology 85(8), e23506.

Measurement of the health and disease status of free-ranging primates is often limited by a lack of available biomarkers of immune activation and inflammation that can be applied noninvasively via the measurement of urine or...

Jones, M, Alexander, M. E., Lightbody, S. et al. 2023. Influence of social enrichment on transport stress in fish: A behavioural approach. Applied Animal Behaviour Science 262, 105920.

Ornamental fishes are among the most commonly owned companion animals in the world, however, the transportation process during acquisition can result in fishes being exposed to biotic and abiotic conditions which compromise welfare. While many...

Bortoletti, M., Fonsatti, E., Leva, F. et al. 2023. Influence of transportation on stress response and cellular oxidative stress markers in juvenile meagre (Argyrosomus regius). Animals 13(20), 3288.

In aquaculture, the transportation of live fish is a crucial but stress-inducing practice, necessitating a thorough understanding of its impact on fish welfare. This study aimed to assess the physiological stress response of meagre (Argyrosomus...

Cameron, A. S., Rub, A. M. W., Sandford, B. P. 2023. Evaluation of healing progression at surgical incision sites and the use of antiseptics for enhancing post-operative survival in subyearling Chinook salmon (Oncorhynchus tshawytscha). PLOS ONE 18(7), e0288056.

In an attempt to develop more effective surgical implantation methods for fish, surgical incisions typical of those made for implanting micro-acoustic transmitters into the peritoneal cavity were evaluated on a weekly basis for healing progression...

Gui, F., Sun, H., Qu, X. et al. 2023. Temperature and dissolved oxygen lead to behavior and respiration changes in juvenile largemouth bass (Micropterus salmoides) during transport. Fishes 8(12), 565.

The study aimed to investigate the effects of temperature and dissolved oxygen on juvenile largemouth bass during transportation. The experiment involved four temperature groups: 20, 15, 10, and 5 °C. We analyzed the effects of...

Piekarski, N., Hobbs, T. R., Jacob, D. et al. 2023. A comparison of oocyte yield between ultrasound-guided and laparoscopic oocyte retrieval in rhesus macaques. Animals 13(19), 3017.

Obtaining quality oocytes is a prerequisite for ART-based studies. Here we describe a method for transabdominal ultrasound-guided (US) oocyte retrieval in rhesus macaques (Macaca mullata) and compare it to the standard surgical approach using laparoscopy...

Association of Primate Veterinarians. 2023. Association of Primate Veterinarians guidelines for domestic transport of nonhuman primates in biomedical research. JAALAS 62(3), 198-201.

The purpose of this guidance document is to provide veterinarians and other individuals associated with domestic transportation of nonhuman primates (NHP) with an overview of the critical aspects of the process including planning, execution, and...

Crone, C., Caldara, F. R., Martins, R. et al. 2023. Environmental enrichment for pig welfare during transport. Journal of Applied Animal Welfare Science 26(3), 393–403.

This study aimed to assess the effects of environmental enrichment for pigs during transportation in different phases of their productive cycle. Two trials were conducted, the first during transportation of pigs from the piglet production...

Glover, R. S., Stephen, A. 2023. A novel automatic release cage increases survival of Atlantic salmon (Salmo salar) smolts released at night. Journal of Fish Biology 103(6), 1560–1564.

Trap-and-transport of migratory fish is commonly used to bypass in-river obstructions. On the River Conon in Scotland, Atlantic salmon (Salmo salar) smolts are transported around two hydropower facilities. Smolt release occurs during daylight, when predation...

Kim, J., Lee, J., Kang, K. et al. 2023. Effects of sling belt provision on behaviour, skin lesions, and salivary cortisol level in growing pigs after transport and regrouping. Applied Animal Behaviour Science 269, 106116.

The provision of enrichment material has been widely recommended to mitigate stress and minimise aggressive behaviour as well as enhance the welfare of pigs after transport and regrouping. In this study, we assessed the effects...

Buckmaster, C. L., Levesque, D., LaFollette, M. et al. 2022. Five hot topics in refinement of nonhuman primate neuroscience research. Laboratory Animal Science Professional 10(1) (January/February), 24-26.

Members of the North American 3Rs Collaborative (NA3RsC) refinement initiative have chosen to summarize developments in five hot topics of interest: 1. Tips for welfare-friendly transport, chairing, and restraint; 2. Guidance on refining food and...

Hirata, S. 2022. Sky after 30 years: A brief biography of three biomedical research chimpanzees in Japan. Primates 63(2), 105–108.

This article describes the strategies employed by Kumamoto Sanctuary in Japan to integrate 3 retired chimpanzees – who each spent 30 years singly housed in a biomedical facility – with the sanctuary’s other residents.

Fehrenbach, L. A., Adekanye, A. A., Palillo, M. B. et al. 2022. Internal temperatures of packaging for overnight cross-country shipping of zebrafish (Danio rerio). Comparative Medicine 72(3), 195-203.

As the use of zebrafish (Danio rerio) as a research model continues to rise, so too will the shipping and sharing of zebrafish strains across collaborating institutions. If done incorrectly, shipping can result in significant...

LeFors, J. E., Anderson, L. M., Hanson, M. A. et al. 2022. Assessment of 2 hair removal methods in New Zealand white rabbits (Oryctolagus cuniculus). JAALAS 61(3), 296-303.

Rabbits are frequently used as surgical models in research. However, studies assessing the effects of various hair removal methods on wound healing and surgical site infection (SSI) in rabbits are sparse. Here we evaluated the...

Fink, L. B., Mukobi, A., Gruber, L. et al. 2022. Longitudinal analysis of variability in fecal glucocorticoid metabolite concentrations in three orangutans (Pongo pygmaeus pygmaeus and Pongo pygmaeus abelii) before, during, and after transition from a regular habitat environment to temporary housing in indoor holding facilities. Animals 12(23), 3303.

Considerable research has been conducted on the effects of inter-institutional transfers, but far less consideration has been given to intra-institutional transfers and extended housing in off-habitat holding. On 15 May 2018, The Oregon Zoo’s orangutans...

Mayes, B. T., Tait, L. A., Cowley, F. C. et al. 2022. Stocking density, restricted trough space, and implications for sheep behaviour and biological functioning. Frontiers in Veterinary Science 9, 965635.

Stocking density and trough space allowance can potentially impact sheep welfare during live export voyages. The aim of this study was to assess the welfare implications for sheep housed at five allometric stocking densities, with...

Pedersen, K., Kruhøffer, L. L., Lykkesfeldt, J. et al. 2022. Comparison of the neuromuscular effects of two infusion rates of rocuronium in anesthetized pigs. Acta Veterinaria Scandinavica 64(1), 38.

Neuromuscular blocking agents are frequently administered to pigs used for research. In humans, administration of the drugs is not without risk and may result in accidental awareness under general anaesthesia and postoperative residual neuromuscular blockade...

Klinger, A., Arsuaga-Zorrilla, C. 2022. Considerations for preparation and monitoring of a sheep surgical model. Laboratory Animal Science Professional 10(6) (November/December), 44-46.

ARC’s main objectives are high quality research, safety, and welfare. These objectives are reached through a collaborative effort with research staff to understand the demands of their procedures; planning in the form of emergency drugs...

Ramos, J., Balasch, J. C., Tort, L. 2021. About welfare and stress in the early stages of fish. Frontiers in Veterinary Science 8, 634434.

In conclusion, the investigations carried out up to now demonstrate that during the early stages fish show high sensitivity to many types of stressors involving an array of responses to overcome alterations that could affect...

Manell, E., Hedenqvist, P., Jensen-Waern, M. 2021. Training pigs for oral glucose tolerance test—Six years’ experience of a refined model. Animals 11(6), 1677.

Animal models of human diseases are important in biomedical research. When using animals for scientific purposes, the 3Rs (replace, reduce, refine) should be considered. Refinement of animal models is essential to ensure best use of...

Wilson-Welder, J. H., Frank, A. T. 2021. Use of food enrichment for medication delivery in large groups of sheep. Laboratory Animal Science Professional 9(3) (May/June), 40-43.

In a 2018 AALAS webinar on Sheep and Goat Analgesia, Dr. Susie Vogel, a small ruminant expert, introduced the concept of getting sheep and goats to willingly take medication by putting it in a tasty...

Camargo-dos-Santos, B., Carlos, C. L., Favero-Neto, J. et al. 2021. Welfare in Nile tilapia production: Dorsal fin erection as a visual indicator for insensibility. Animals 11(10), 3007.

In aquaculture, to ensure animal welfare in pre-slaughter and slaughter stages, it is fundamental that fish are insensible. A method for evaluating fish insensibility is based on visual sensibility indicators (VSI) assessment (i.e., self-initiated behavior...