Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Burlingame, L. A., Na, J., Dunbar, M. et al. 2014. Behavioral ethogram as a health assessment tool in a feline vaccine study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 610. (Abstract #P227).

For infectious disease studies, assessment of feline health is traditionally limited to metrics such as body temperature (BT), change in body weight (BW), and clinical signs (CS). Recently, behavioral ethograms designed for assessment of rabbits...

Chapagain, D., Uvns-Moberg, K., Lidfors, L. M. 2014. Investigating the motivation to play in lambs. Applied Animal Behaviour Science 160, 64-74.

The aim of this study was to identify behaviours and ear postures linked to the appetitive, consummatory and post-consummatory motivational phases of play in male lambs, and to evaluate how cortisol was affected by play...

Proctor, H. S., Carder, G. 2014. Can ear postures reliably measure the positive emotional state of cows? Applied Animal Behaviour Science 161, 20-27.

Animal welfare science is increasingly concerned with the promotion of positive emotions in animals, yet little is known about how to measure them. We examined whether ear postures in dairy cows were reliable indicators of...

Turner, P. V., Viscardi, A., Lawli, P. et al. 2014. Evaluation of analgesic efficacy in piglets using a novel pig grimace scale. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 530 (Abstract #PS12).

There is a critical lack of information surrounding methods to improve the wellbeing of piglets undergoing painful procedures. It is not uncommon for piglets to undergo potentially painful procedures without anesthesia or analgesia, particularly for...

Whittaker, A. L., Howarth, G. S. 2014. Use of spontaneous behaviour measures to assess pain in laboratory rats and mice: How are we progressing? Applied Animal Behaviour Science 151, 1-12.

The understanding and recognition of pain in laboratory rats and mice has advanced considerably in recent times. However, there is evidence that despite these advances, analgesics are still relatively underutilised in these species. One possible...

Roller, J. E., Meyers, M. 2014. Positive reinforcement training in a research setting: An introduction to sling training the Ossabaw pig. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 539. (Abstract #PS51).

Over the past year, the large animal care staff at our institution was introduced to an unfamiliar breed of pig, the Ossabaw Island pig. Not only were they tasked with adapting to this unique research...

Kalliokoski, O., Teilmann, A. C., Jacoben, K. R. et al. 2014. Do singly housed male mice get lonely? Evidence of depressive states after short-term single housing of BALB/c and C57BL/6 mice. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 597. (Abstract #P184).

Through behavioral and preference studies we know that mice prefer company. Laboratory mice should thus never be housed alone, if a viable option exists. Yet single housing is a fairly common practice, in particular with...

Rushen, J., de Passillé, A. M., Appleby, M. C. et al. 2014. Alone or together: A risk assessment approach to group housing. In: Dilemmas in Animal Welfare. Appleby, M. C., Weary, D. M., Sandøe, P. (eds), 169-187. CAB International, Oxfordshire, UK.

The question of whether it is better to house animals in groups rather than alone deals with the unresolved issues at the heart of animal welfare. In particular, we need to be able to rank...

Rock, M. L., Rodriguez, K., Karas, A. Z. et al. 2014. The time-to-integrate-to-nest test as an indicator of wellbeing in laboratory mice. JAALAS 53(1), 24-28.

Minimizing and alleviating pain and distress in laboratory mice without compromising the methodologic integrity of research is a crucial goal. However, current methods for welfare assessment in mice are not well suited to cageside checks...

Rock, M. L., Karas, A. Z., Gallo, M. S. et al. 2014. Housing condition and nesting experience do not affect the time to integrate to nest test (TINT). Animal Welfare 23(4), 381-385.

Managing and assessing well-being in laboratory mice (Mus musculus) is both challenging and necessary. Assessments intended to detect negative welfare states in mice are usually performed via observation of animals in the home cage, but...

Horback, K. 2014. Nosing around: Play in pigs. Animal Behavior and Cognition 2(2), 186.

The predominant method of measuring welfare in swine focuses on overt physical ailments, such as skin lesions, lameness, and body condition. An alternative metric for assessing welfare in swine can be to measure the frequency...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...

Lambeth, S. P., Schapiro, S. J., Bernacky, B. J. et al. 2013. Establishing 'quality of life' parameters using behavioural guidelines for humane euthanasia of captive non-human primates. Animal Welfare 22(4) 429-435.

Chronic pain and distress are universally accepted conditions that may adversely affect an animal’s quality of life (QOL) and lead to the humane euthanasia of an animal. At most research institutions and zoological parks in...

Lockhart, J., Wilson, K., Lanman, C. 2013. The effects of operant training on blood collection for domestic cats. Applied Animal Behaviour Science 143(2-4), 128-134.

The impact of operantly training domestic cats to accept jugular blood collections in a dorsally recumbent (novel) position was assessed. Cats were assigned to one of three groups: Group 1 (N = 14): no training...

Hrapkiewicz, K., Colby, L. A., Denison, P. 2013. Clinical Laboratory Animal Medicine: An Introduction (4th Ed). Wiley-Blackwell, Ames, IA.

Clinical Laboratory Animal Medicine: An Introduction, Fourth Edition offers a user-friendly guide to the unique anatomy and physiology, care, common diseases, and treatment of small mammals and nonhuman primates. Carefully designed for ease of use...

Gaskill, B. N., Karas, A. Z., Garner. J. P. et al. 2013. Nest building as an indicator of health and welfare. JoVE (Journal of Visualized Experiments) 83, e51012.

We demonstrate the utility of nest building behavior in laboratory mice as an indicator of welfare. Nest scoring is a sensitive technique that is altered by temperature, illness, and aggression. The time to integrate into...

Perlman, J. E., Bloomsmith, M. A., Whittaker, M. A. et al. 2012. Implementing positive reinforcement animal training programs at primate laboratories. Applied Animal Behaviour Science 137(3-4), 114-126.

In the last decade several surveys of primate care and training programs highlight a common theme; despite scientific evidence that animal training can be effective in reducing stress, increasing efficiency and improving veterinary care, animal...

Coleman, K. 2012. Individual differences in temperament and behavioral management practices for nonhuman primates. Applied Animal Behaviour Science 137(3-4), 106-113.

This review will examine how individual differences in temperament might affect, or be affected by, behavioral management practices for captive primates. Measuring temperament may help us predict the outcome of social introductions. It can also...

Camacho, J. N., Boskovic, S., Moeller, E. 2012. Improved nonhuman primate social housing using visual cues associated for an intensive research study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 636-637 (Abstract #PS35).

Lean management-based visual tools have been used to improve the quality of animal care associated with a complex research study involving immune-compromised cynomolgus monkeys (M. fascicularis) in various postsurgical recovery states. In order to effectively...

Martin, A. L., Bloomsmith, M. A., Perlman, J. E. 2011. An assessment program to monitor behavior and evaluate treatment of behavioral problems. American Journal of Primatology 73(S1), 85. (34th Meeting of the American Society of Primatologists Scientific Program, Abstract #159)

At the Yerkes National Primate Center we have developed a system for behavioral assessment that includes these elements: frequent observation of behavior for all primates with a check sheet-type record; a quantitative system for recording...

Neubauer, T., Betts, T., Evans, C. 2011. The use of enrichment to facilitate data collection in a pig study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 762-763 (Abstract #P80).

Recently a researcher approached our large animal facility manager about housing 19, 2-mo-old piglets and assisting with data collection. Part of the protocol required that the piglets be fed an individually measured high-sugar/high-fat diet over...

Hawkins, P., Burn, C., Hurst, J. et al. 2011. Report of the 2010 RSPCA/UFAW rodent welfare group meeting - The effect of husbandry on welfare and promoting good practice. Animal Technology and Welfare 10(2), 105-114.

The RSPCA/UFAW Rodent Welfare Group holds a one-day meeting every autumn so that its members can discuss current welfare research, exchange views on rodent welfare issues and share experiences of the implementation of the 3Rs...

Ekesbo, I. 2011. Sheep. In: Farm Animal Behavior: Characteristics for Assessment of Health and Welfare, 1st edition. Fraser, A. F. , Broom, D. M. (ed). CABI, Oxfordshire, UK. pp. 82-92.

Each chapter follows a consistent pattern describing the behavioral characteristics of the species featured. Reference is made to the natural state before domestication, leading us through the various changes to the present, demonstrating along the...

Arblaster, F. 2010. Clicker training in minipigs. Animal Technology and Welfare 9, 115-118.

Clicker training minipigs provides a significant improvement in the dermal dosing procedures.

Watts, A. 2010. Thinking outside the box in box training. Tech Talk [The Newsletter for Laboratory Animal Science Technicians] 15(2), 3.

At the Oregon National Primate Research Center, we train animals to enter transfer boxes using positive reinforcement training (PRT), a type of training in which the trainer reinforces desired behaviors (such asentering the transfer box)...