Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Allanic, M., Hayashi, M., Matsuzawa, T., 2020. Investigating the function of mutual grooming in captive bonobos (Pan paniscus) and Chimpanzees (Pan troglodytes). Folia Primatologica 91, 481-494.

Social grooming is often exchanged between individuals in many primate species. Rates of bidirectional (or simultaneous mutual) grooming vary across primate species, and its function is not yet fully understood. For example, mutual grooming is...

Krueger, L. D., Thurston, S. E., Kirk, J. et al. 2020. Enrichment preferences of singly housed zebrafish (Danio rerio). JAALAS 59(2), 148–155.

Despite the increasing popularity of zebrafish (Danio rerio) as an animal model, the environmental enrichment preferences of this species have been largely unexplored. We sought to determine the preferences of mature female zebrafish that were...

Thoré, E. S. J., Brendonck, L., Pinceel, T. 2020. Conspecific density and environmental complexity impact behaviour of turquoise killifish (Nothobranchius furzeri). Fish Biology 97(5), 1448–1461.

Fish models are essential for research in many biological and medical disciplines. With a typical lifespan of only 6 months, the turquoise killifish (Nothobranchius furzeri) was recently established as a time- and cost-efficient model to...

LaFleur, R. A., Williams-Fritze, M. J. 2020. Now hear this: Caring for chinchillas in research. Laboratory Animal Science Professional 8(5) (September/October), 8-12.

This article describes the authors’ experience with the housing, social housing, husbandry, handling, and environmental enrichment of chinchillas in laboratories.

Rodgers, J. C., Ricart Arbona, R. J., Lieggi, C. et al. 2020. Evaluation of cotton dental rolls as environmental enrichment for mice. Laboratory Animal Science Professional 8(5) (September/October), 70-71.

Historically, we provided 2 compressed cotton squares for nesting and enrichment. The logistics of managing nesting material distribution, disposal, and costs are major considerations for our program, which provides husbandry to approximately 60,000 rodent cages...

Baskir, E. A., Kucharski, S., Powell, D. M. 2020. Chinchilla (Chinchilla lanigera) behavioral responses to a visual signal preceding handling. Zoo Biology 39(6), 391-396.

Zoos use ambassador animals in educational programs featuring close contact with humans. Chinchillas (Chinchilla lanigera) at the Saint Louis Zoo are retrieved for programs by a keeper wearing brown handling gloves, but green cleaning gloves...

Bodden, C., Wewer, M., Kästner, N. et al. 2021. Not all mice are alike: Mixed-strain housing alters social behaviour. Physiology & Behavior 228, 113220.

The use of millions of mice in scientific studies worldwide emphasises the continuing need for a reduction of sample sizes, however, not at the expense of scientific validity. Split-plot designs have been suggested to enhance...

Ruberto, T., Talbot, J. L., Reddon, A. R. 2020. Head up displays are a submission signal in the group-living daffodil cichlid. Behavioural Processes 181, 104271.

Dominance hierarchies can reduce conflict within social groups and agonistic signals can help to establish and maintain these hierarchies. Behaviours produced by subordinates in response to aggression are often assumed to function as signals of...

Shelton, D. S., Shelton, S. G., Daniel, D. K. et al. 2020. Collective behavior in wild zebrafish. Zebrafish 17(4), 243-252.

Anthropogenic change is expected to alter environments at alarming rates. To predict the impact of modified environments on social behavior, we must study the relationship between environmental features and collective behavior in a genetically tractable...

Theil, J. H., Ahloy-Dallaire, J., Weber, E. M. et al. 2020. The epidemiology of fighting in group-housed laboratory mice. Scientific Reports 10(1), 16649.

Injurious home-cage aggression (fighting) in mice affects both animal welfare and scientific validity. It is arguably the most common potentially preventable morbidity in mouse facilities. Existing literature on mouse aggression almost exclusively examines territorial aggression...

Vogt, M. A., Mertens, S., Serba, S. et al. 2020. The ‘Cage Climber’ - A new enrichment for use in large-dimensioned mouse facilities. Applied Animal Behaviour Science 230, 105078.

Environmental Enrichment has been shown in experimental contexts to have clear and often beneficial effects on animal physiology and behavior. Housing prior to experiments can represent a large proportion of an animal’s living conditions, and...

Yamanashi, Y., Bando, H., Matsunaga, M. et al. 2020. Development of bed-building behaviors in captive chimpanzees (Pan troglodytes): Implication for critical period hypothesis and captive management. Primates 61(5), 639-646.

Wild great apes build beds for sleeping by combining tree branches or other vegetation, but the development of this behavior is poorly understood. We investigated the development of bed-building behaviors by conducting complementary cross-sectional and...

Grífols, R., Zamora, C., Ortega-Saez, I. et al. 2020. Postweaning grouping as a strategy to reduce singly housed male mice. Animals 10(11), 2135.

Rearing laboratory mice in groups is important since social isolation after weaning induces brain alterations, which entails behavioral abnormalities in adulthood. Age is an important factor when grouping males of different litters due to inter-male...

Meikle, M. N., Arévalo, A. P., Schlapp, G. et al. 2020. Long-term effect of environmental enrichment on reproductive performance of Swiss Webster mice and their female offspring. Animals 10(8), 1438.

The aim of this study was to evaluate the effect of an environmental enrichment (EE) plan on the reproductive performance of Swiss Webster mice and their female offspring used as recipients for embryo transfer. A...

Pedrazzani, A. S., Quintiliano, M. H., Bolfe, F. et al. 2020. Tilapia on-farm welfare assessment protocol for semi-intensive production systems. Frontiers in Veterinary Science 7, 606388.

The aim of this study was to develop and test a tilapia on-farm welfare assessment protocol, based on Brazilian semi-intensive production systems. The study included two mains steps: the elaboration of tilapia welfare protocol and...

Coventry, C. 2020. Positive reinforcement training as physiotherapy for a brown capuchin (Sapajus apella). RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 47(2), 16-17.

Physiotherapy can be used to treat an animal following surgery, to help correcting abnormal gait and for treating tendon, bone or ligament damage. […] Of course, an animal can’t just be given a set of...

Boesch, C. 2020. Mothers, environment, and ontogeny affect cognition. Animal Behavior and Cognition 7(3), 474–489.

The book “Folk Physics for Apes” remains a fascinating book about the way one captive peer-group of chimpanzees understand the world in which they grew. However, the very special living conditions these seven individuals faced...

Dewaele, A., Badonnel, K., Persuy, M.-A. et al. 2020. Effect of environmental exposure to a maternally-learned odorant on anxiety-like behaviors at weaning in mice. Animal Cognition 23(5), 881–891.

Early sensory experience, such as exposure to maternal or other environmental factors, is considered to influence neurocognitive development and behaviors. In many species, exposure to odorants during pregnancy or lactation impacts the morpho-functional development of...

Lefebvre, E., Granon, S., Chauveau, F. 2020. Social context increases ultrasonic vocalizations during restraint in adult mice. Animal Cognition 23(2), 351–359.

Adult mice emit many ultrasonic vocalizations (USVs) during social interaction tasks, but only a few studies have yet reported USVs in stressed adult mice. Our aim was to study which experimental conditions favor USV emission...

Tan, S. L. T., Handasyde, K. A., Rault, J.-L. et al. 2020. Insensitivity to reward shifts in zebrafish (Danio rerio) and implications for assessing affective states. Animal Cognition 23(1), 87–100

Theory and empirical findings predict that individuals in a negative affective state are more sensitive to unexpected reward loss and less sensitive to unexpected reward gain compared to individuals in a neutral or positive affective...

Butler, J. L., Kennerley, S. W. 2019. Mymou: A low-cost, wireless touchscreen system for automated training of nonhuman primates. Behaviour Research Methods 51, 2559–2572.

Training nonhuman primates (NHPs) to perform cognitive tasks is essential for many neuroscientific investigations, yet laboratory training is a time-consuming process with inherent limitations. Habituating NHPs to the laboratory staff and experimental equipment can take...

Webb, S. J. N., Hau, J., Schapiro, S. J. 2019. Does group size matter? Captive chimpanzee (Pan troglodytes) behavior as a function of group size and composition. American Journal of Primatology 81(1), e22947.

The National Institutes of Health and the Association of Zoos and Aquariums recommend that captive chimpanzees be housed in multi‐male, multi‐female, age‐diverse groups of no less than seven individuals. These recommendations are rooted in the...

Nagy-Reis, M. B., Mendonça-Furtado, O., Resende, B. 2019. Do social factors related to allostatic load affect stereotypy susceptibility? Management implications for captive social animals. Animal Welfare 28(2), 183-190.

Stereotypies are frequently associated with sub-optimal captive environments and are used as welfare indicators. However, susceptibility to stereotypy can vary across individuals of the same group. As such, identifying which individuals are more susceptible to...

Bolognesi, M. C., dos Santos Gauy, A. C., Gonçalves-de-Freitas, E. 2019. Tactile stimulation reduces aggressiveness but does not lower stress in a territorial fish. Scientific Reports 9, 40.

Body tactile stimulation has a positive effect upon highly social animals, such as mammals and cleaner-client coral-reef fish, by relieving stress and improving health. Conversely, some tactile contacts are naturally detrimental, such as those resulted...

Batzina, A., Drossos, I.-P., Karakatsouli, N. 2019. Effects of familiarity on individual growth and feeding behaviour of European seabass Dicentrarchus labrax. Applied Animal Behaviour Science 211, 112-117.

Available literature indicates that fish are able to recognize familiar conspecifics and that familiarity may offer important benefits (e.g. more stable social environment, improved foraging behavior, growth, survival). In the practice of intensive rearing of...