Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Redaelli, V., Papa, S., Marsella, G. et al. 2019. A refinement approach in a mouse model of rehabilitation research. Analgesia strategy, reduction approach and infrared thermography in spinal cord injury. PLOS ONE 14(10), e0224337.

The principles of Refinement, Replacement and Reduction (3R’s) should be taken into account when animals must be used for scientific purpose. Here, a Reduction / Refinement approach was applied to the procedure of spinal cord...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Smith, B. J., Bruner, K., Kendall, L. V. 2019. Female- and intruder-induced ultrasonic vocalizations in C57BL/6J mice as proxy indicators for animal wellbeing. Comparative Medicine 69(5), 374–383.

Female urine-induced male mice ultrasonic vocalizations (FiUSV) are ultrasonic vocalizations produced by adult male mice after presentation of adult female urine, whereas intruder-induced ultrasonic vocalizations (IiUSV) are produced by resident adult female mice when interacting...

Rowland, N. E., Toth, L. A. 2019. Analytic and interpretational pitfalls to measuring fecal corticosterone metabolites in laboratory rats and mice. Comparative Medicine 69(5), 337–349.

Minimization and alleviation of stress are generally viewed as desirable aspects of laboratory animal management and use. However, achieving that goal requires an unambiguous and valid measure of stress. Glucocorticoid concentrations are commonly used as...

McMillan, F. D. (ed). 2019. Mental Health and Well-being in Animals (2nd ed). CABI, Wallingford, UK.

This second edition is fully revised, expanded, and comprehensively updated with the most current knowledge about the full array of mental health issues seen in animals. Written by key opinion leaders, internationally-recognized experts and specialists...

Makowska, I. J., Weary, D. M. 2019. A good life for laboratory rodents? ILAR Journal 60(3), 373-388.

Most would agree that animals in research should be spared “unnecessary” harm, pain, or distress, and there is also growing interest in providing animals with some form of environmental enrichment. But is this the standard...

Gomes, D., McSweeney, L., Santos, M. 2019. Effects of environmental enrichment techniques on stereotypical behaviours of captive Sumatran tigers: A preliminary case study. Journal of Animal Behaviour and Biometeorology 7(4), 144-148.

Wild animals are maintained in Zoological facilities for purposes of education, conservation, research, and recreation. Several studies have proven that the surroundings of an animal's artificial habitat, as well as environmental enrichment techniques, are factors...

Bacon, H. 2018. Behaviour-based husbandry—A holistic approach to the management of abnormal repetitive behaviors. Animals 8(7), 103.

The field of zoo animal welfare science has developed significantly over recent years. However despite this progress in terms of scientific research, globally, zoo animals still face many welfare challenges. Recently, animal welfare frameworks such...

Mei, J., Riedel, N., Grittner, U. et al. 2018. Body temperature measurement in mice during acute illness: Implantable temperature transponder versus surface infrared thermometry. Scientific Reports 8, 3526.

Body temperature is a valuable parameter in determining the wellbeing of laboratory animals. However, using body temperature to refine humane endpoints during acute illness generally lacks comprehensiveness and exposes to inter-observer bias. Here we compared...

Toth, L. A. 2018. Identifying and implementing endpoints for geriatric mice. Comparative Medicine 68(6), 439–451.

The types of changes in physical appearance and behavior that occur in elderly people similarly develop in elderly animals. Signs and symptoms that might cause concern in younger people or mice may be normal in...

Vaz, J., Narayan, E. J., Dileep Kumar, R. et al. 2017. Prevalence and determinants of stereotypic behaviours and physiological stress among tigers and leopards in Indian zoos. PLOS ONE 12(4), e0174711.

India’s charismatic wildlife species are facing immense pressure from anthropogenic-induced environmental perturbations. Zoos play a major role in the conservation of threatened species, but their adaptation in captivity is posing a major challenge globally. Stress...

Rose, P. E., Nash, S. M., Riley, L. M. 2017. To pace or not to pace? A review of what abnormal repetitive behavior tells us about zoo animal management. Journal of Veterinary Behavior 20, 11-21.

Performance of abnormal repetitive behavior (ARB) is noted in many captive wild species. ARB can be categorized into 2 basic forms: those whose aim appears to be to compulsively reach an inappropriate goal and those...

Phillips, C. J. C., Tribe, A., Lisle, A. et al. 2017. Keepers' rating of emotions in captive big cats, and their use in determining responses to different types of enrichment. Journal of Veterinary Behavior 20, 22-30.

Effective identification of emotional states in captive big cats by keepers is important for them to be able to reduce the risks of abnormal behavior by providing appropriate enrichment strategies. In an initial study, 29...

Grant, C., Marks, L., Prior, H. 2017. Provision of food and water in rodent whole body plethysmography safety pharmacology respiratory studies – Impact on animal welfare and data quality. Journal of Pharmacological and Toxicological Methods 88(Part 1), 79-84.

Introduction: We evaluated the feasibility of providing food and water to rodents during whole body plethysmography (WBP) studies as a welfare improvement to standard conditions. Methods: Male Han Wistar rats or CD1 mice (n=8) were...

Novak, J., Stojanovski, K., Melotti, L. et al. 2016. Effects of stereotypic behaviour and chronic mild stress on judgement bias in laboratory mice. Applied Animal Behaviour Science 174, 162-172.

Cognitive processes are influenced by underlying affective states, and tests of cognitive bias have recently been developed to assess the valence of affective states in animals. These tests are based on the fact that individuals...

Novak, J., Bailoo, J. D., Melotti, L. et al. 2016. Effect of cage-induced stereotypies on measures of affective state and recurrent perseveration in CD-1 and C57BL/6 mice. PLOS ONE 11(5), e0153203.

Stereotypies are abnormal repetitive behaviour patterns that are highly prevalent in laboratory mice and are thought to reflect impaired welfare. Thus, they are associated with impaired behavioural inhibition and may also reflect negative affective states...

Joshi, S., Pillay, N. 2016. Personality predicts the responses to environmental enrichment at the group but not within-groups in stereotypic African striped mice, Rhabdomys dilectus. Applied Animal Behaviour Science 182, 44-52.

Environmental enrichment is used to enhance the well-being of captive animals and to prevent or reduce stereotypic and other abnormal behaviours. However, environmental enrichment does not always succeed in its intended purpose. We investigated whether...

Franchi, V., Aleuy, O. A., Tadich, T. A. 2016. Fur chewing and other abnormal repetitive behaviors in chinchillas (Chinchilla lanigera), under commercial fur-farming conditions. Journal of Veterinary Behavior 11, 60-64.

Fur chewing is a behavioral disorder frequently reported in chinchillas kept for fur-farming purposes. Rodents kept in barren cages usually develop some form of abnormal repetitive behavior, which can indicate a past or present welfare...

Winnicker, C., Gaskill, B., Garner, J. P. et al. 2016. A Guide to the Behavior & Enrichment of Laboratory Rodents. Charles River Laboratories.

Covering species-typical behavior as well as abnormal/malfunctional behavior and stereotypes observed in mice, rats, hamsters and gerbils, this is an excellent resource for those looking to implement or enhance an existing behavioral husbandry and enrichment...

Harper, L., Choleris, E., Ervin, K. et al. 2015. Stereotypic mice are aggressed by their cage-mates and tend to be poor demonstrators in social learning tasks. Animal Welfare. 24(4), 463-473.

Stereotypic behaviours (SBs) are linked with behavioural inflexibility and resemble symptoms of autism, suggesting that stereotypic animals could have autistic-like social impairments. SBs are also common in caged mice. We therefore hypothesised relationships between stereotypic...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Bode, A. E., Barber, H. 2014. Use of vinyl nonadhesive tape as an alternative for positioning rodents in small animal imaging. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 597-598. (Abstract #P185).

Specific positioning for different imaging modalities is essential in our small animal imaging core. While we have different animal holders designed to position the animal inside the MRI, additional securing of the animal to the...

Tupper, T., Manning, H., Turner, D. et al. 2014. An innovative restraint device for the placement of intravenous tail vein catheters in anesthetized mice. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 584. (Abstract #P136).

Consistently accurate intravenous tail vein administration of radiopharmaceuticals in anesthetized mice is a critical component of successful PET/CT imaging in the preclinical setting. Injectable anesthetics are often not suitable for PET imaging and commercially available...

Vaughan, L. M., Dawson, J. S., Porter, P. R. et al. 2014. Castration promotes welfare in group-housed male Swiss outbred mice maintained in educational institutions. JAALAS 53(1), 38-43.

Educational institutions maintain group-housed mice of both sexes for training veterinarians and technicians in husbandry, medication, and sampling procedures. Mice kept in all-male groups may experience poor welfare due to fighting. Castrated mice may be...

Pritchett-Corning, K. R., Keefe, R., Garner, J. P. et al. 2013. Can seeds help with the daily grind? American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 609 (Abstract #PS5).

Some laboratory mice gnaw food pellets without ingesting much of the gnawed material, resulting in the production of waste material called orts. The fact that this food grinding behavior is not seen in all individuals...