Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Warwick, C., Pilny, A., Steedman, C. et al. 2023. Mobile zoos and other itinerant animal handling events: Current status and recommendations for future policies. Animals 13(2), 214.

Mobile zoos are events in which non-domesticated (exotic) and domesticated species are transported to venues such as schools, hospitals, parties, and community centres, for the purposes of education, entertainment, or social and therapeutic assistance. We...

Williams, E., Hunton, V., Hosey, G. et al. 2023. The impact of visitors on non-primate species in zoos: A quantitative review. Animals 13(7), 1178.

Visitors are a prominent feature in the lives of zoo animals, and their presence can cause a range of impacts on zoo animals (typically classed as positive, negative or neutral impacts), commonly referred to as...

Bertin, A., Mulot, B., Nowak, R. et al. 2023. Captive blue-and-yellow macaws (Ara ararauna) show facial indicators of positive affect when reunited with their caregiver. Behavioural Processes 206, 104833.

In mammals, human-animal bonding is recognized as a source of positive affect for companion or farm animals. Because this remains unexplored in birds, we investigated captive parrots’ perspective of the human-animal relationship. We used a...

Ferguson, L. T., Rashied, A. A., Liang, Z. et al. 2023. A novel scoring system for humane endpoints in mice with cecal ligation and puncture-induced sepsis. Comparative Medicine 73(6), 446–460.

Animal-based research is essential to the study of sepsis pathophysiology, diagnostics, and therapeutics. However, animal models of sepsis are often associated with high mortality because of the difficulty in predicting imminent death based on premortem...

Cho, E., Walsh, C. A., D’Angelo-Gavrish, N. M. et al. 2023. Effects of housing density on reproductive performance, intracage ammonia, and welfare of mice continuously housed as breeders in standard mouse and rat caging. JAALAS 62(2), 116–122.

Maintaining compliance with cage density recommendations in The Guide for the Care and Use of Laboratory Animals precludes continuous trio breeding in standard-sized mouse cages. This study evaluated and compared several parameters of reproductive performance...

Acharya, R. Y., Hemsworth, P. H., Coleman, G. J. et al. 2022. The animal-human interface in farm animal production: Animal fear, stress, reproduction and welfare. Animals 12(4), 487.

A negative human-animal relationship (HAR) from the perspective of the animal is a limiting factor affecting farm animal welfare, as well as farm animal productivity. Research in farm animals has elucidated sequential relationships between stockperson...

Jardat, P., Calandreau, L., Ferreira, V. et al. 2022. Pet-directed speech improves horses' attention toward humans. Scientific Reports 12(1), 4297.

In a recent experiment, we showed that horses are sensitive to pet-directed speech (PDS), a kind of speech used to talk to companion animals that is characterized by high pitch and wide pitch variations. When...

Scariot, P. P., Gobatto, C. A., Polisel, E. E. et al. 2022. Early-life mice housed in standard stocking density reduce the spontaneous physical activity and increase visceral fat deposition before reaching adulthood. Laboratory Animals 56(4), 344-355.

Laboratory rodents spend the entire day housed in standard cages that provide a restricted area for movements and might, therefore, limit physical activity. However, it has not been tested in immature rodents of ages ranging...

Brough, D. W., Murkin, J. T., Amos, H. E. et al. 2022. Comparing variability in measurement of subcutaneous tumors in mice using 3D thermal imaging and calipers. Comparative Medicine 72(6), 364–375.

Repeatable tumor measurements are key to accurately assessing tumor growth and treatment efficacy. A preliminary study that we conducted showed that a novel 3D and thermal imaging system (3D-TI) for measuring subcutaneous tumors in rodents...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Merkies, K., Franzin, O. 2021. Enhanced understanding of horse–human interactions to optimize welfare. Animals 11(5), 1347.

Horses (Equus caballus) have been domesticated for millennia and are regularly utilized for work, sport, and companionship. Enhanced understanding of human–horse interactions can create avenues to optimize their welfare. This review explores the current research...

Learmonth, M. J., Sherwen, S., Hemsworth, P. 2021. Assessing choice ability and preferences of five Leopard Tortoises (Stigmochelys pardalis) for three stimuli through a novel two-phase preference test. Journal of Zoo and Aquarium Research, 9(2), 94-101.

Preference testing has long been used in ethology and animal welfare science to assess the preferences that animals have for different resources and stimuli. The study conducted herein assessed the choice-making ability of five leopard...

Learmonth, M. J., Sherwen, S., Hemsworth, P. H. 2021. Assessing preferences of two zoo-housed Aldabran giant tortoises (Aldabrachelys gigantea) for three stimuli using a novel preference test. Zoo Biology 40(2), 98-106.

Recent research has uncovered many complex cognitive traits and affective processes in many reptile species, such as the ability to make choices that are rewarding or pleasurable. The investigation herein was initiated after many years...

Kelly, K. J., McDuffee, L. A., Mears, K. 2021. The effect of human–horse interactions on equine behaviour, physiology, and welfare: A scoping review. Animals 11(10), 2782.

Human–horse interactions (HHIs) are diverse and prominent in the equine industry. Stakeholders have an invested interest in making sure that HHIs are humane. Assessment of equine welfare goes beyond physical health and includes assessment of...

Winn, C. B., Hwang, S. K., Morin, J. et al. 2021. Automated monitoring of respiratory rate as a novel humane endpoint: A refinement in mouse metastatic lung cancer models. PLOS ONE 16(9), e0257694.

In oncology research, while xenograft tumor models are easily visualized and humane endpoints can be clearly defined, metastatic tumor models are often based on more subjective clinical observations as endpoints. This study aimed at identifying...

Miller, A. L., Roughan, J. V. 2021. Welfare assessment, end-point refinement and the effects of non-aversive handling in C57BL/6 mice with Lewis lung cancer. Animals 12(1), 23.

Cancer-bearing mice are at risk of developing anxiety, pain, or malaise. These conditions may not only harm welfare but could also undermine data quality and translational validity in studies to develop therapeutic interventions. We aimed...

Riley, A., Terry, M., Freeman, H. et al. 2021. Evaluating the effect of visitor presence on Nile crocodile (Crocodylus niloticus) behavior. Journal of Zoological and Botanical Gardens 2(1), 115–129.

Visitor presence has been shown to affect the behavior of animals in zoos. However, studies to date have not included a wide range of taxonomic groupings, and thus, the effect is poorly understood for many...

Andreasen, S. N., Sandøe, P., Waiblinger, S. et al. 2020. Negative attitudes of Danish dairy farmers to their livestock correlates negatively with animal welfare. Animal Welfare 29(1), 89-98.

Positive stockperson attitudes to his or her animals is associated with a positive behavioural response in the animals and in other indicators assumed to reflect a high level of welfare as well as increased productivity...

Schrimpf, A., Single, M., Nawroth, C. 2020. Social referencing in the domestic horse. Animals 10(1), 164.

Dogs and cats use human emotional information directed to an unfamiliar situation to guide their behavior, known as social referencing. It is not clear whether other domestic species show similar socio-cognitive abilities in interacting with...

Stomp, M., Masson, A., Henry, S. et al. 2020. Could snorts inform us on how horses perceive riding? Behavioural Processes 172, 104041.

Several previous studies have shown that working conditions (including riding) can induce stress in horses. Riders’ actions and postures, when inappropriate, induce stress and conflict behaviours during riding and welfare impairment and negative emotional states...

Talbot, S. R., Biernot, S., Bleich, A. et al. 2020. Defining body-weight reduction as a humane endpoint: A critical appraisal. Laboratory Animals 54(1), 99–110.

In many animal experiments scientists and local authorities define a body-weight reduction of 20% or more as severe suffering and thereby as a potential parameter for humane endpoint decisions. In this study, we evaluated distinct...

Raspa, F., Tarantola, M., Bergero, D. et al. 2020. Stocking density affects welfare indicators in horses reared for meat production. Animals 10(6), 1103.

Horses kept for meat production are reared in intensive breeding farms. We employed a checklist adapted from the Animal Welfare Indicators (AWIN) assessment protocol. Our evaluation aims to assess whether welfare indicators are influenced by...

Nwagwu, C. D., Defensor, E., Jiang, M. Y. et al. 2020. Endpoint in ovarian cancer xenograft model predicted by nighttime motion metrics. Lab Animal 49(8), 227–232.

Despite several therapeutics showing promise in nonclinical studies, survival from ovarian cancer remains poor. New technologies are urgently needed to optimize the translation of nonclinical studies into clinical successes. While most nonclinical settings utilize subjective...

Wilkinson, M. J. A., Selman, C., McLaughlin, L. et al. 2020. Progressing the care, husbandry and management of ageing mice used in scientific studies. Laboratory Animals 54(3) 225–238.

Driven by the longer lifespans of humans, particularly in Westernised societies, and the need to know more about ‘healthy ageing’, ageing mice are being used increasingly in scientific research. Many departments and institutes involved with...

Zhang, X., Kumstel, S., Tang, G. et al. 2020. A rational approach of early humane endpoint determination in a murine model for cholestasis. ALTEX 37(2), 197-207.

Reduction of animal suffering during in vivo experiments is usually ensured by continuously monitoring the health status using a score sheet and by applying humane endpoints. However, most studies do not evaluate the plausibility of...