Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Serres, A., Xu, C., Hao, Y. et al. 2021. The click production of captive Yangtze finless porpoises (Neophocaena asiaeorientalis asiaorientalis) is influenced by social and environmental factors. Animals 11(2), 511.

Yangtze finless porpoises use high-frequency clicks to navigate, forage, and communicate. The way in which click production may vary depending on social or environmental context has never been investigated. A group of five captive Yangtze...

Burlingame, L. A., Gaskill, B. N., Lofgren, J. L. S. 2021. Identification of sick or dead mice (Mus musculus) housed with 6 grams of crinkle paper nesting material. JAALAS 60(1), 18-27.

Although nesting material is beneficial to the welfare of laboratory mice, provision of appropriate amounts may impair visualization of the mice. In anticipation of our academic research institution transitioning to providing 6 grams of nesting...

Allen, P. S., Lawrence, J., Stasula, U. et al. 2021. Effects of compressed paper bedding on mouse breeding performance and recognition of animal health concerns. JAALAS 60(1), 28-36.

The combination of bedding substrate and nesting material within the microenvironment of mice is an important consideration for animal care programs in regard to optimizing animal wellbeing. We used 3 general or breeding mouse colonies...

Oatess, T. L., Harrison, F. E., Himmel, L. E. et al. 2021. Effects of acrylic tunnel enrichment on anxiety-like behavior, neurogenesis, and physiology of C57BL/6J mice. JAALAS 60(1), 44-53.

Environmental enrichment for mice lags behind the standard enrichment offered to other laboratory rodents due to concerns about environmental variability and, in specific contexts, aggression. Our objective in this study was to evaluate concerns that...

Kendall, L. V., Singh, B., Bailey, A. L. et al. 2021. Pharmacokinetics and efficacy of a long-lasting, highly concentrated buprenorphine solution in mice. JAALAS 60(1), 64-71.

Buprenorphine is a commonly used opioid for mitigating pain in laboratory mice after surgical procedures; however, the dosing interval necessary for standard buprenorphine may require treatment every 4 to 6 h to maintain an adequate...

Marques Maia, C., Pacheco Capelini Alves, N., Tatemoto, P. 2021. Juvenile Nile tilapia fish avoid red shelters. Journal of Applied Animal Welfare Science, 24(1), 98-106.

Shelters are frequently used for fish rearing to improve welfare conditions. In this study, whether Nile tilapia prefers specific shelter colors was evaluated. Thus, fish preference for white, red, blue, green or yellow shelters was...

Adcock, A., Choleris, E., Denommé, M. et al. 2021. Where are you from? Female mice raised in enriched or conventional cages differ socially, and can be discriminated by other mice. Behavioural Brain Research 400, 113025.

Laboratory rodents raised in environmentally-enriched (EE) cages differ behaviourally and cognitively from conventionally-housed (CH) animals. We hypothesised that mice can detect such differences, testing this using differentially-raised female C57BL/6 s as subjects, and differentially-raised female...

Marchetto, L., Barcellos, L. J. G., Koakoski, G. et al. 2021. Auditory environmental enrichment prevents anxiety-like behavior, but not cortisol responses, evoked by 24-h social isolation in zebrafish. Behavioural Brain Research 404, 113169.

The zebrafish (Danio rerio) is widely used as a promising translational model organism for studying various brain disorders. Zebrafish are also commonly used in behavioral and drug screening assays utilizing individually tested (socially isolated) fish...

Stevens, A., Doneley, R., Cogny, A. et al. 2021. The effects of environmental enrichment on the behaviour of cockatiels (Nymphicus hollandicus) in aviaries. Applied Animal Behaviour Science 235, 105154.

Most research to enrich the environment of psittacines in captivity has focused on foraging. Little is known about the importance of bathing substrates for enrichment of their environment, despite this being a natural behaviour that...

Berlinghieri, F., Panizzon, P., Penry-Williams, I. L. et al. 2021. Laterality and fish welfare - A review. Applied Animal Behaviour Science 236, 105239.

Humans interact with fishes in many contexts including aquaculture, scientific study and companion animals. In all of these contexts, fish welfare can be compromised through anthropogenic means. Concern for fish welfare has grown considerably in...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Tatemotoa, P., Valença-Silva, G., Queiroz, M. R. et al. 2021. Living with low environmental complexity increases fear indicators in Nile tilapia. Animal Behaviour 174, 169-174.

Animals are often kept in conditions with low environmental complexity and for long periods in barren artificial environments. This has been shown to lead to poor welfare in many species of animals. We assessed the...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Stevens, C., Hawkins, P., Smulders, T. V. et al. 2021. Report of the 2020 RSPCA/UFAW rodent and rabbit welfare meeting. Animal Technology and Welfare 20(1), 21-33.

The RSPCA/UFAW rodent and rabbit welfare group has held a one-day meeting every autumn for the last 27 years, so that its members can discuss current welfare research, exchange views on welfare issues and share...

Stevens, C. H., Reed, B. T., Hawkins, P. 2021. Enrichment for laboratory zebrafish—A review of the evidence and the challenges. Animals 11(3), 698.

Good practice for the housing and care of laboratory zebrafish Danio rerio is an increasingly discussed topic, with focus on appropriate water quality parameters, stocking densities, feeding regimes, anaesthesia and analgesia practices, methods of humane...

Whittaker, A. L., Liu, Y., Barker, T. H. 2021. Methods used and application of the mouse grimace scale in biomedical research 10 years on: A scoping review. Animals 11(3), 673.

The Mouse Grimace Scale (MGS) was developed 10 years ago as a method for assessing pain through the characterisation of changes in five facial features or action units. The strength of the technique is that...

Giménez-Llort, L., Torres-Lista, V. 2021. Social nesting, animal welfare, and disease monitoring. Animals 11(4), 1079.

The assessment of welfare and disease progression in animal models is critical. Most tools rely on evaluating individual subjects, whereas social behaviors, also sensitive to acute illness, chronic diseases, or mental health, are scarcely monitored...

Manthey, T., Nagel-Riedasch, S., Dülsner, A. 2021. The interactive stress assessment in basic animal science training. Animals 11(7), 2145.

In order to assess the extent to which the legally prescribed training for the acquisition of animal experimentation expertise provides scientific personnel with the necessary competence and expertise to carry out a correct harm-benefit analysis...

Huettner, T., Dollhaeupl, S., Simon, R. et al. 2021. Activity budget comparisons using long-term observations of a group of bottlenose dolphins (Tursiops truncatus) under human care: Implications for animal welfare. Animals 11(7), 2107.

Zoos and aquaria must provide optimal husbandry conditions and the highest welfare standards for their animals. How the welfare state of an animal or a group of animals can be precisely assessed is currently under...

dos Santos Gauy, A. C., Bolognesi, M. C., Martins, G. D. et al. 2021. Preference and motivation tests for body tactile stimulation in fish. Animals 11(7), 2042.

We tested whether territorial fish (Nile tilapia) perceive body tactile stimulation as a positive or negative resource. Individual male fish were placed for eight days in an aquarium containing a rectangular PVC frame, which was...

Whittaker, A. L., Golder-Dewar, B., Triggs, J. L. et al. 2021. Identification of animal-based welfare indicators in captive reptiles: A Delphi consultation survey. Animals 11(7), 2010.

There is an increasing focus on evidence-based welfare assessment by animal care staff in zoos, along with a strong interest in animal welfare by the zoo-visiting public, to the extent that this can influence their...

Úbeda, Y., Ortín, S., Robeck, T. R. et al. 2021. Personality of killer whales (Orcinus orca) is related to welfare and subjective well-being. Applied Animal Behaviour Science 237, 105297.

Questionnaires are very useful tools when it comes to assessing zoo based animal measures and caretakers of these animals (such as keepers, trainers and veterinarians) are in the best position to provide accurate answers to...

van der Geest, J. N., Spoor, M., Frens, M. A. 2021. Environmental enrichment improves vestibular oculomotor learning in mice. Frontiers in Behavioral Neuroscience 15, 676416.

We assessed the behavioral effects of environmental enrichment on contrast sensitivity, reflexive eye movements and on oculomotor learning in mice that were housed in an enriched environment for a period of 3 weeks. Research has...

Moody, C. M., Paterson, E. A. Leroux-Petersen, D. et al. 2021. Using paper nest pucks to prevent barbering in C57BL/6 mice. JAALAS 60(2), 133-138.

Little research has been conducted to examine the influence of various methods of providing nest materials—such as dispersing them, providing them as single units, or clustering them—on the behavior and welfare of group-housed mice. In...

Edwards, J., Olson, B., Marks, D.L. 2021. Constructing and programming a cost-effective murine running wheel with digital revolution counter. Lab Animal 50, 202-204.

Voluntary wheel running is a valuable metabolic intervention and well-established measure of physical activity in preclinical rodent models. Herein, we describe detailed assembly instructions and provide necessary resources for researchers to build their own running...