Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
von Keyserlingk, M. A. G., Amorim Cestari, A., Franks, B. 2017. Dairy cows value access to pasture as highly as fresh feed. Scientific Reports 7, 44953.

Many dairy cows in the developed world are now housed exclusively indoors with fewer than 5% of the 10 million lactating cows in the United States having access to pasture during the grazing season. Indoor...

Tucker, R. D. 2017. Woodchuck College. Laboratory Animal Science Professional 5(2) (June), 33-36.

Marmota monax is a valuable laboratory animal species used in studies of Hepatitis B virus (HBV), food intake, obesity, hibernation, and circannual cycles. This article describes the woodchuck’s (also known as groundhog) natural behavior and...

Grant, C., Marks, L., Prior, H. 2017. Provision of food and water in rodent whole body plethysmography safety pharmacology respiratory studies – Impact on animal welfare and data quality. Journal of Pharmacological and Toxicological Methods 88(Part 1), 79-84.

Introduction: We evaluated the feasibility of providing food and water to rodents during whole body plethysmography (WBP) studies as a welfare improvement to standard conditions. Methods: Male Han Wistar rats or CD1 mice (n=8) were...

Haughton, C. L., Gawriluk, T. R., Seifert, A. W. 2016. The biology and husbandry of the African spiny mouse (Acomys cahirinus) and the research uses of a laboratory colony. JAALAS 55(1), 9–17.

African spiny mice (Acomysspp.) are unique precocial rodents that are found in Africa, the Middle East, and southern Asia. They exhibit several interesting life-history characteristics, including precocial development, communal breeding, and a suite of physiologic...

Ross, S. R., Shender, M. A. 2016. Daily travel distances of zoo-housed chimpanzees and gorillas: Implications for welfare assessments and space requirements. Primates 57(3), 395-401.

The degree to which the relatively smaller area of artificial environments (compared with natural habitats) has measureable effects on the behavior and welfare of captive animals has been debated for many years. While there is...

Shepley, E., Bergeron, R., Bécotte, F. et al. 2016. Dairy cow preference for outdoor access during winter under Eastern Canada climatic conditions. Canadian Journal of Animal Science 97(1), 1-5.

Cows on two separate farms were submitted to a 6 d preference test, repeated four times, consisting of three 2 d phases (3 h d−1 phase−1): forced-indoor, forced-outdoor, and free-choice. A majority of cows on...

Winnicker, C., Gaskill, B., Garner, J. P. et al. 2016. A Guide to the Behavior & Enrichment of Laboratory Rodents. Charles River Laboratories.

Covering species-typical behavior as well as abnormal/malfunctional behavior and stereotypes observed in mice, rats, hamsters and gerbils, this is an excellent resource for those looking to implement or enhance an existing behavioral husbandry and enrichment...

Goto, T., Okayama, T., Toyoda, A. 2015. Strain differences in temporal changes of nesting behaviors in C57BL/6N, DBA/2N, and their F1 hybrid mice assessed by a three-dimensional monitoring system. Behavioural Processes 119, 86-92.

Nest building is one of the innate behaviors that are widely observed throughout the animal kingdom. Previous studies have reported specific brain regions and genetic loci associated with nest building in mice. These studies mainly...

Nääs, I. A., Garcia, R. G., Caldara, F. R. 2015. Infrared thermal image for assessing animal health and welfare. Journal of Animal Behaviour and Biometeorology 2(3), 66-72.

Infrared thermal imaging is a non-destructive testing technology that can be used to determine the superficial temperature of objects. This technology has an increasing use in detecting diseases and distress in animal husbandry within the...

Witme, G. W., Snow, N. P., Moulton, R. S. 2014. Responses by wild house mice (Mus musculus) to various stimuli in a novel environment. Applied Animal Behaviour Science 159, 99-106.

House mice (Mus musculus) pose a threat to the native flora and fauna on islands, and can cause significant damage wherever they have been introduced. Methods used to eradicate invasive rodents, like house mice, at...

Bergman, T. J., Sheehan, M. J. 2013. Social knowledge and signal in primates. American Journal of Primatology 75(7), 683-694.

Primates are notable for having a rich and detailed understanding of their social environment and there has been great interest in the evolution and function of social knowledge in primates. Indeed, primates have been shown...

Rault, J.-L. 2012. Friends with benefits: Social support and its relevance for farm animal welfare. Applied Animal Behaviour Science 136(1), 1-14.

Despite growing interest in promoting positive welfare, rather than just alleviating poor welfare, potential measures of good welfare, and means to provide it, have remained elusive. In humans social support improves stress-coping abilities, health, and...

Whittaker, A. L., Howarth, G. S., Hickman, D. L. 2012. Effects of space allocation and housing density on measures of wellbeing in laboratory mice: A review. Laboratory Animals 46(1), 3-13.

In the majority of countries where there are legislative requirements pertaining to the use of animals in research, figures are quoted for minimum cage sizes or space allocation to be provided per animal. These figures...

Merriman, D. K., Lahvis, G., Jooss, M. et al. 2012. Current practices in a captive breeding colony of 13-lined ground squirrels (Ictidomys tridecemlineatus). Lab Animal 41(11), 315-325.

The authors provide an update to their 2006 report on the successful large-scale captive breeding of the 13-lined ground squirrel (TLGS; Ictidomys tridecemlineatus) in their colony, now a single-source supplier of purpose-bred TLGSs for several...

Buijs, S., Maertens, L., Tuyttens, F. A. M. et al. 2011. Glucocorticoid metabolites in rabbit faeces - Influence of environmental enrichment and cage size. Physiology & Behavior 104(3), 469-473.

The concentration of glucocorticoid metabolites (GCM) in rabbit faeces has been suggested as a non-invasive indicator of stress. In the present study, GCM concentrations were measured in faeces of fattening rabbits kept in groups of...

Williams-Fritze, M. J., Altieri, J. A., Clough, C. et al. 2010. Modification of a dog cage for use as an exercise unit for rabbits. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 703 (Abstract #P70).

The Guide for the Care and Use of Animals and the USDA Animal Welfare Regulations (AWR) outline minimum space requirements for laboratory animals, including rabbits. These documents encourage housing of animals in enclosures that allow...

Hawkins, P., Hubrecht, R., Buckwell, A. et al. 2008. Refining Rabbit Care: A Resource for Those Working With Rabbits in Research. UFAW/RSPCA: Southwater, UK, 27 pp.

The report sets out how to provide: optimal enclosure characteristicsand size; social housing; solid flooring and substrate; raised areas; refuges; gnawing objects and dietary enrichment; positive interaction with humans; toys and objects to manipulate; for...

Onbasilar, E. E., Onbasilar, Í. 2007. Effect of cage density and sex on growth, food utilization and some stress parameters of young rabbits. Scandinavian Journal of Laboratory Animal Science 34(3),189-195.

The aim of the experiment was to study the effects of cage density (1, 3 and 5 rabbits per cage) and sex (male and female) on stress parameters of young rabbits. A total of 90...

Koski, S. E., Sterck, E. H. M. 2007. Triadic postconflict affiliation in captive chimpanzees: does consolation console? Animal Behaviour 73(1), 133-142.

Consolation is a triadic postconflict interaction between a conflict participant and an uninvolved third party. We tested whether consolation alleviates postconflict stress in captive chimpanzees, Pan troglodytes. In addition, we examined whether consolation is a...

Crast, J. 2007. Socially-mediated learning in groups of primates: models and methods. American Journal of Primatology 69(S1), 74. (30th Meeting of the American Society of Primatologists Scientific Program, Abstract #90)

An ethological understanding of a behavioral phenomenon incorporates four levels of explanation: development, mechanism, function, and evolution. The phenomenon of socially-mediated learning has garnered a great deal of attention from ethologists, prominently including primatologists. Gregarious...

Conour, L. A., Murray, K. A., Brown, M. J. 2006. Preparation of animals for research -- Issues to consider for rodents and rabbits. ILAR Journal 47(4), 283-293.

This article provides details to consider when preparing to use animals in biomedical research. The stress of transport and receipt of animals into a new environment mandate the need for a period of stabilization and...

Bloomsmith, M. A., Schapiro, S. J., Strobert, E. A. 2006. Preparing chimpanzees for laboratory research. ILAR Journal 47(4), 316-325.

The chimpanzee is the only representative of the Great Apes that is extensively involved in biomedical research in primate laboratories. These apes are used as animal models in a variety of studies, including research on...

Smith, A. L., Mabus, S. L., Muir, C. et al. 2005. Effects of housing density and cage floor space on three strains of young adult inbred mice. Comparative Medicine 55(4), 368-376.

Some recommendations in the Guide for the Care and Use of Laboratory Animals (the Guide) are based on best professional judgment. Our current efforts are directed toward replacement with data-driven standards. We demonstrated earlier that...

Hutchinson, E., Avery, A., Van de Woude, S. 2005. Environmental enrichment for laboratory rodents. ILAR Journal 46(2), 148-161.

In this article, laws and guidelines relating to rodent enrichment are reviewed, the natural behaviors of select rodent species are discussed, and an overview of widely used types of enrichment in laboratory rodent management is...

Pruetz, J. D. E., McGrew, W. C. 2001. What does a chimpanzee need? Using natural behavior to guide the care and management of captive populations. In: Special Topics in Primatology, volume 2. The Care and Management of Captive Chimpanzees. Brent, L. (Ed.). The American Society of Primatologists: San Antonio, TX, 16-37.

Their tendency toward natural behavior is probably little changed from their wild counterparts, despite the overwhelming influence of captivity on behavior... From a chimpanzee's point of view, it would be better to stimulate behavior characteristics...