Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Clarke, D., Ioannou, L. 2018. Introduction of gang caging for group housed rats. Animal Technology and Welfare 17(2), 136-137.

Using an existing gang cage designed for ferrets, we developed a version that would be suitable for housing rats. Caging consisted of 3 floors with a combined floor area of 11620m, connected by 2 ladders...

Graham, C., von Keyserlingk, M. A. G., Franks, B. 2018. Zebrafish welfare: Natural history, social motivation and behaviour. Applied Animal Behaviour Science 200, 13-22.

Zebrafish are now one of the most used animal model species in scientific research worldwide. Our current knowledge of wild zebrafish is limited to an estimated range of their natural habitats and their tendencies to...

Sirovnik, J., Stratmann, A., Gebhardt-Henrich, S. G. et al. 2018. Feeding from perches in an aviary system reduces aggression and mortality in laying hens. Applied Animal Behaviour Science 202, 53-62.

Some commercial aviary systems for laying hens allow birds to access feed by standing on perches instead of platforms. Despite reports that providing laying hens with perches relates to reduced aggression and cannibalism, and increased...

Gebhardt-Henrich, S. G., Toscano, M. J., Würbel, H. 2018. Use of aerial perches and perches on aviary tiers by broiler breeders. Applied Animal Behaviour Science 203, 24-33.

Perching, especially during the night, is an innate behaviour of chickens and the provision of perches is mandatory for laying hens in multiple countries. We examined whether broiler breeders of the fast (Ross 308) and...

Bailie, C. L., Baxter, M., O’Connell, N. E. 2018. Exploring perch provision options for commercial broiler chickens. Applied Animal Behaviour Science 200, 114-122.

Two related experiments involving broiler chickens are presented. Experiment 1 evaluated the use of six perch types: (1) an A-frame design (incorporating a platform and ramps), (2) a ‘flat top’ ramp, (3) a curved ramp...

Bailoo, J. D., Murphy, E., Varholick, J. A. et al. 2018. Evaluation of the effects of space allowance on measures of animal welfare in laboratory mice. Scientific Reports 8, 713.

We studied how space allowance affects measures of animal welfare in mice by systematically varying group size and cage type across three levels each in both males and females of two strains of mice (C57BL/6ByJ...

Campbell, D. L. M., Horton, B. J., Hinch, G. N. 2018. Using radio-frequency identification technology to measure synchronised ranging of free-range laying hens. Animals 8(11), 210.

Free-range laying hen systems provide individuals a choice between indoor and outdoor areas where range use may be socially influenced. This study used radio-frequency identification technology to track the ranging of individually-tagged hens housed in...

Hempstead, M. N., Waas, J. R., Stewart, M. et al. 2018. Evaluation of alternatives to cautery disbudding of dairy goat kids using behavioural measures of post-treatment pain. Applied Animal Behaviour Science 206, 32-38.

Alternatives to cautery disbudding (caustic paste and cryosurgical disbudding, and clove oil injection) were evaluated using behavioural measures of post-treatment pain in dairy goat kids. Fifty Saanen doe kids were randomly assigned to one of...

Norman, K. I., Weeks, C. A., Pettersson, I. C. et al. 2018. The effect of experience of ramps at rear on the subsequent ability of layer pullets to negotiate a ramp transition. Applied Animal Behaviour Science 208, 92-99.

In commercial situations, laying hens must negotiate levels to reach resources such as food, water and litter. Providing ramps in aviary systems reduces collisions and resultant keel bone fractures in adults. We investigated whether providing...

Stachowicz, J., Gygax, L., Hillmann, E. et al. 2018. Dairy goats use outdoor runs of high quality more regardless of the quality of indoor housing. Applied Animal Behaviour Science 208, 22-30.

For dairy goats in loose housing, access to an outdoor run has potential welfare benefits as it provides additional space, enables spatial separation and may offer items representing behavioural enrichment for the goats (e.g. brush...

Edwards, G. L., Michael, J. A., Parks., A. 2018. Agricultural animals as biomedical models: Occupational health and safety considerations. ILAR Journal 59(2), 161-167.

The use of agricultural animals in biomedical research is increasing. Their overall size and metabolic rate, organ size, longer gestation period, and other physiological similarities make them good candidates for animal models of human disease...

Darbyshire, A. K., Salleng, K., Chen,P. 2018. The shocking lives of electric eels. Laboratory Animal Science Professional 6(1) (March), 14-18.

Electric eels (Electrophorus electricus) are a unique species used for behavioral research in the Vanderbilt Animal Care and Use Program. Few resources are available to describe the housing and handling of this species in captivity...

Hempstead, M. N., Waas, J. R., Stewart, M. et al. 2018. The effectiveness of clove oil and two different cautery disbudding methods on preventing horn growth in dairy goat kids. PLOS ONE 13(11), e0198229.

The effectiveness of clove oil and cautery disbudding on horn growth was evaluated in goat kids. The study used 243 Saanen doe kids (4±1 days old; mean±SD) on two goat farms that were disbudded with...

Gjendal, K., Lund Ottesen, J., Bratbo Sørensen, D. 2018. Does colour matter? Preference of mice for different colours of the house mouse igloo: An observational study. Scandinavian Journal of Laboratory Animal Science 44(6).

It is argued that mice have poor colour vision and are insensitive to the colour red, which they in theory perceive as dark. Therefore, the red tinted Bio-Serv Mouse Igloo® is used to provide mice...

Larsen, H., Cronin, G., Smith, C. L. et al. 2017. Behaviour of free-range laying hens in distinct outdoor environments. Animal Welfare 26(3), 255-264.

The outdoor range in free-range, egg-production systems contains features that aim to promote the performance of natural behaviours. It is unclear what features of the range laying hens prefer and how these influence hen behaviour...

Bestman, M., Verwer, C., Brenninkmeyer, C. et al. 2017. Feather-pecking and injurious pecking in organic laying hens in 107 flocks from eight European countries. Animal Welfare 26(3), 355-363.

Feather-pecking and cannibalism may reduce the potential of organic husbandry to enhance the welfare of laying hens. We report risk factors for these issues based on a large survey of 107 commercial flocks in eight...

Tsang, B., Zahid, H., Ansari, R. et al. 2017. Breeding zebrafish: A review of different methods and a discussion on standardization. Zebrafish 14(6), 561-573.

In recent years, a rapidly increasing number of scientific papers have been published that utilize zebrafish (Danio rerio) as an alternative model organism in the study of a wide range of biological phenomena from cancer...

Castelhano-Carlos, M. J., Baumans, V., Sousa, N. 2017. PhenoWorld: Addressing animal welfare in a new paradigm to house and assess rat behaviour. Laboratory Animals 51(1), 36-43.

The use of animals is essential in biomedical research. The laboratory environment where the animals are housed has a major impact on them throughout their lives and influences the outcome of animal experiments. Therefore, there...

Stella, J. L., Croney, C. C., Buffington, C. T. 2017. Behavior and welfare of domestic cats housed in cages larger than U.S. norm. Journal of Applied Animal Welfare Science 20(3), 296-312.

The effect of providing additional floor space on cat behavior and welfare is not well documented. This study involved replication of an investigation of cats’ responses to enhanced cage and room environments using cages of...

Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

Brenneis, C., Westhof, A., Holschbach, J. et al. 2017. Automated tracking of motion and body weight for objective monitoring of rats in colony housing. JAALAS 56(1), 18-31.

Living together in large social communities within an enriched environment stimulates self-motivated activity in rats. We developed a modular housing system in which a single unit can accommodate as many as 48 rats and contains...

Polissidis, A., Zelelak, S., Nikita, M. et al. 2017. Assessing the exploratory and anxiety-related behaviors of mice. Do different caging systems affect the outcome of behavioral tests? Physiology & Behavior 177, 68-73.

Ample studies have shown that housing can affect the health, welfare and behavior of mice and therefore, the outcomes of certain experiments. The aim of this study was to investigate if three widely used housing...

Barker, T. H., Bobrovskaya, L., Howarth, G. S. et al. 2017. Female rats display fewer optimistic responses in a judgment bias test in the absence of a physiological stress response. Physiology & Behavior 173, 124-131.

Metabolic cages are a type of housing used in biomedical research. Metabolic cage housing has been demonstrated to elicit behavioural and physiological changes in rodents housed within them. The nature of this effect has been...

Simpson, D. 2017. Investigation of transportation on rat acclimatisation using novel cage side recording equipment (Rodent Big Brother). Animal Technology and Welfare 16(1), 1-12.

The transportation of animals from supplier to experimental facility is one of the biggest stressors to animals in research. Transportation unavoidably causes stress and when the animals arrive at the testing facility they require a...

Jones, T., Robinson, M., Leach, M. et al. 2017. Ultrasonic vocalisation as a measure of positive welfare in rats. Animal Technology and Welfare 16(2), 127-129.

Studies of animal welfare in laboratory animals have historically relied on the measurement of negative indicators rather than the assessment of positive indicators of welfare. Practical methods of welfare assessment are required to allow refinement...