Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
MacAllister, R. P., Heagerty, A., Coleman, K. 2020. Behavioral predictors of pairing success in rhesus macaques (Macaca mulatta). American Journal of Primatology 82(1), e23081.

Pair housing is one of the most important components of behavioral management for caged macaques; however, it can result in aggression and injury if partners are incompatible. Knowing when to proceed and when to stop...

da Silva, A., Lima, M. R., Meletti, P. C. et al. 2020. Impact of environmental enrichment and social group size in the aggressiveness and foraging activity of Serrapinnus notomelas. Applied Animal Behaviour Science 224, 104943.

Fish are widely used in scientific research, and many species are bred for ornamental purposes and human consumption. Despite the large number of fish kept in captivity, research on the welfare of these animals has...

de la Garza, F., Cannon, C. Z. 2020. Piggy see, piggy do: A swine training program enhances animal welfare and research. Laboratory Animal Science Professional 8(2) (March/April), 54-57.

Becton Dickinson (BD) Animal Research Program developed an extensive training and environmental enrichment program to acclimate newly arrived swine to daily husbandry routines. The program seeks to build trust between swine and animal care and...

Veasey, J. 2020. Assessing the psychological priorities for optimising captive Asian elephant (Elephas maximus) welfare. Animals 10(1), 39.

The welfare status of elephants under human care has been a contentious issue for two decades or more in numerous western countries. Much effort has gone into assessing the welfare of captive elephants at individual...

Paredes-Ramos, P., Diaz-Morales, J. V., Espinosa-Palencia, M. et al. 2020. Clicker training accelerates learning of complex behaviors but reduces discriminative abilities of Yucatan miniature pigs. Animals 10(6), 959.

Animal training is meant to teach specific behavioral responses to specific cues. Clicker training (CT) is a popular training method based on the use of a device that emits a sound of double-click to be...

Johnston, J. R., Meeker, T. L., Ramsey, J. K. et al. 2020. Utility of automated feeding data to detect social instability in a captive breeding colony of rhesus macaques (Macaca mulatta): A case study of intrafamily aggression. JAALAS 59(1), 46–57.

Some captive breeding colonies of rhesus macaques live in large outdoor multimale, multifemale social groups. These groups are composed of several matrilineal families, governed by a clear female dominance hierarchy. Aggression within the same or...

Chu, D. 2020. Malawi cichlids: A colorful 4th R story. Laboratory Animal Science Professional 8(3) (May/June), 24-25.

This article describes the successful rehoming of 60 Malawi cichlids from a vivarium at Stanford University to San Diego Zoo and the California Academy of Sciences.

Mendonça Soares, S., Kirsten, K., Pompermaier, A. et al. 2020. Sex segregation affects exploratory and social behaviors of zebrafish according to controlled housing conditions. Physiology & Behavior 222, 112944.

Zebrafish has become an animal model in research and articles have established ideal conditions for their maintenance. However, little is known regarding the influence of gender and other cues on zebrafish behavior. Thus, here we...

Mishra, P. S., Pal, A., Velankar, A. D. et al. 2020. Does rank rule? Rank-related grooming patterns in Nicobar long-tailed macaques Macaca fascicularis umbrosus. Primates 61(3), 443–453.

Primates maintain social bonds with specific individuals in the group by directing grooming toward them. Social grooming is often targeted toward individuals with whom the most benefits can be exchanged, which are usually the high-ranking...

Stocker, M. Loretto, M.-C., Sterck, E. H. M. et al. 2020. Cooperation with closely bonded individuals reduces cortisol levels in long-tailed macaques. Royal Society Open Science 7(5), 7191056.

Many animal species cooperate with conspecifics in various social contexts. While ultimate causes of cooperation are being studied extensively, its proximate causes, particularly endocrine mechanisms, have received comparatively little attention. Here, we present a study...

Hambrecht, S., Oerke, A.‐K., Heistermann, M. et al. 2020. Diurnal variation of salivary cortisol in captive African elephants (Loxodonta africana) under routine management conditions and in relation to a translocation event. Zoo Biology 39(3), 186–196.

The present study assessed the diurnal variation in salivary cortisol in captive African elephants during routine management (baseline) and in relation to a potential stressor (translocation) to evaluate to what extent acute stress may affect...

Turcsán, B., Tátrai, K., Petró, E. et al. 2020. Comparison of behavior and genetic structure in populations of family and kenneled beagles. Frontiers in Veterinary Science 7, 183.

In dogs, the social and spatial restriction associated with living in a kennel environment could lead to chronic stress and the development of abnormal behaviors (“kennel-dog syndrome”). However, little is known about how kenneled dogs...

Parois, S. P., Duttlinger, A. W., Richert, B. T. et al. 2020. Effects of three distinct 2-week long diet strategies after transport on weaned pigs' short and long-term welfare markers, behaviors, and microbiota. Frontiers in Veterinary Science 7, 140.

Alternative feed supplements have shown promising effects in terms of performance, but their effects on welfare have had little evaluation. In the present study, we aimed at evaluating the effect of diet supplementation on welfare...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Allanic, M., Hayashi, M., Matsuzawa, T., 2020. Investigating the function of mutual grooming in captive bonobos (Pan paniscus) and Chimpanzees (Pan troglodytes). Folia Primatologica 91, 481-494.

Social grooming is often exchanged between individuals in many primate species. Rates of bidirectional (or simultaneous mutual) grooming vary across primate species, and its function is not yet fully understood. For example, mutual grooming is...

Rydén, A., Manell, E., Biglarnia, A. et al. 2020. Nursing and training of pigs used in renal transplantation studies. Laboratory Animals 54(5), 469-478.

The pig is commonly used in renal transplantation studies since the porcine kidney resembles the human kidney. To meet the requirements of intense caretaking and examination without stress, a 2-week socialisation and training programme was...

Kendrick, J., Stow, R., Ibbotson, N. et al. 2020. A novel welfare and scientific approach to conducting dog metabolism studies allowing dogs to be pair housed. Laboratory Animals 54(6), 588-598.

Metabolism cages are designed to conduct absorption, distribution, metabolism and excretion (ADME) studies, enabling an ‘excretion balance’ scientific objective to be met. Historically, the design of dog metabolism cages has involved single housing. This type...

Cassidy, L. C., Hannibal, D. L., Semple, S. et al. 2020. Improved behavioral indices of welfare in continuous compared to intermittent pair-housing in adult female rhesus macaques (Macaca mulatta). American Journal of Primatology 82(10), e23189.

Limiting opportunities for captive nonhuman primates (NHPs) to express species-specific social behaviors may disrupt the adaptive drive for social companionship and may lead to increases in coping behaviors and inactivity. While captive NHPs show improved...

Dorey, N. R., Blandina, A., Udell, M. A. R. 2020. Clicker training does not enhance learning in mixed-breed shelter puppies (Canis familiaris). Journal of Veterinary Behavior 39, 57-63.

Clicker training has been a popular form of training for decades and is used in zoos, aquariums, and shelters. Only a handful of studies have investigated the efficacy of the clicker-training method itself despite its...

Evison, E., McKenzie, A., Holmes, L. 2020. Social and environmental impacts on sleep in captive Asian elephants (Elephas maximus). Zoo Biology 39(6), 397-404.

Modern zoos strive to improve standards of animal management, husbandry and welfare of their animals as part of a continual evaluation process. Elephants (Elephantidae) have received particular attention in recent years due to the challenge...

Glaeser, S. S., Edwards, K. L., Wielebnowski, N. et al. 2020. Effects of physiological changes and social life events on adrenal glucocorticoid activity in female zoo-housed Asian elephants (Elephas maximus). PLOS ONE 15(11), e0241910.

Ensuring good health and welfare is an increasingly important consideration for conservation of endangered species and includes breeding of individuals managed under human care. Understanding how factors in the captive environment affect individual animal wellbeing...

Griffin, K. E., John, E., Pike, T. et al. 2020. Can this dog be rehomed to you? A qualitative analysis and assessment of the scientific quality of the potential adopter screening policies and procedures of rehoming organisations. Frontiers in Veterinary Science 7, 1121.

Unwanted dogs are an international problem, and rehoming organisations are tasked with finding many of them appropriate homes. Whilst the processes involved in assessing dogs' suitability for rehoming have received considerable academic attention, the policies...

Ko, H., Chong, Q., Escribano, D. et al. 2020. Pre-weaning socialization and environmental enrichment affect life-long response to regrouping in commercially-reared pigs. Applied Animal Behaviour Science 229, 105044.

Weaning and other regrouping events as routine work in commercial farms cause stress to pigs and compromise their welfare. Several studies found positive outcomes to mitigate weaning stress when piglets were socialized (i.e. co-mingled) or...

Ruberto, T., Talbot, J. L., Reddon, A. R. 2020. Head up displays are a submission signal in the group-living daffodil cichlid. Behavioural Processes 181, 104271.

Dominance hierarchies can reduce conflict within social groups and agonistic signals can help to establish and maintain these hierarchies. Behaviours produced by subordinates in response to aggression are often assumed to function as signals of...

Shelton, D. S., Shelton, S. G., Daniel, D. K. et al. 2020. Collective behavior in wild zebrafish. Zebrafish 17(4), 243-252.

Anthropogenic change is expected to alter environments at alarming rates. To predict the impact of modified environments on social behavior, we must study the relationship between environmental features and collective behavior in a genetically tractable...