Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Golledge, H., Richardson, C. (Eds.) 2024. The UFAW Handbook on the Care and Management of Laboratory and Other Research Animals (9th ed.). Wiley-Blackwell. 1040 p.

The latest edition of the seminal reference on the care and management of laboratory and research animals. The newly revised ninth edition of The UFAW Handbook on the Care and Management of Laboratory and Other...

Kaleel, K. L., Secoura, P. L., Muñoz-Pérez, J. P. et al. 2024. Endoscopy and rectal enema for fecal collection in wild sea turtles (Chelonia mydas, Eretmochelys imbricata) in a field setting. Zoo Biology 43(1), 55–60.

Forty-seven free-ranging sea turtles (46- Chelonia mydas, 1- Eretmochelys imbricata) were examined via novel use of an endoscopy combined with a rectal enema to obtain large fecal sample volumes. The cloaca was insufflated using an...

Song, Y., Xie, S. 2024. Effects of substrate roughening on the swimming performance of Schizothorax wangchiachii (Fang, 1936) in the Heishui River: Implications for vertical slot fishway design. Journal of Fish Biology 104(2), 473–483.

Re-establishing the natural connectivity of rivers using fishways may mitigate the unfavourable effects of dam construction on riverine biodiversity and freshwater fish populations. Knowledge of the swimming performance of target species in specific regions is...

Robinson, L. M., Weiss, A. (Eds.) 2023. Nonhuman Primate Welfare: From History, Science, and Ethics to Practice. Springer, Cham, Switzerland. 671 p.

This volume reviews the broad topic of welfare in nonhuman primates under human care. Chapters detail the history of primates in captivity, ethical and legal issues surrounding the use of nonhuman primates as entertainment or...

Alig, B. N., Ferket, P. R., Malheiros, R. D. et al. 2023. The effect of housing environment on commercial brown egg layer production, USDA grade and USDA size distribution. Animals 13(4), 694

Consumer demand for retail cage-free eggs is driving the layer industry towards greater use of extensive housing environments. However, there is limited research on how these environments affect egg production characteristics of brown egg layers...

Corsetti, S., Natoli, E., Palme, R. et al. 2023. Instraspecific interactions decrease stress affecting welfare in shelter dogs: A comparison of four different housing conditions. Animals 13(11), 1828.

Shelters are stressful environments for domestic dogs (Canis familiaris). Evaluating dogs’ welfare is crucial to improve their life condition and to promote a better management of shelters. We aimed at verifying which variables improved welfare...

Lee, G.-H., Jo, W., Kang, T.-K. et al. 2023. Assessment of stress caused by environmental changes for improving the welfare of laboratory beagle dogs. Animals 13(6), 1095.

Animal stress is influenced by environmental factors, yet only a few studies have evaluated the effects of environmental stress on captive dogs. This study aimed to evaluate the effects of environmental and social enrichment on...

Morgado, J. N., Lamonaca, E., Santeramo, F. G. et al. 2023. Effects of management strategies on animal welfare and productivity under heat stress: A synthesis. Frontiers in Veterinary Science 10, 1145610.

Climate change includes different dramatic events, and among them, heat stress exposition is the strongest phenomenon affecting the livestock sector. The effects of heat stress events on animal welfare are complex and the economic impacts...

Paneru, B., Pent, G. J., Nastasi, S. et al. 2023. Effect of silvopasture system on fearfulness and leg health in fast-growing broiler chickens. PLOS ONE 18(3), e0282923.

A silvopasture system intentionally integrates trees, forages, and livestock, allowing dual land use. These systems can provide high-quality habitat for broiler chickens; however, such systems have not been widely adopted by the broiler industry in...

Pennington, E., Springer, C., Albright, J. et al. 2023. Evaluation of different methods of environmental enrichment to control anxiety in dogs undergoing hemilaminectomy after acute intervertebral disc extrusion: A randomized double-blinded study. Frontiers in Veterinary Science 10, 1124982.

The goal of this randomized, double-blinded, placebo-controlled study was to evaluate the effect of environmental enrichment (EE) on post-operative pain and anxiety in dogs following hemilaminectomy for acute intervertebral disc extrusion (IVDE).MethodsTwenty healthy client-owned dogs...

Skånberg, L., Newberry, R. C., Estevez, I. et al. 2023. Environmental change or choice during early rearing improves behavioural adaptability in laying hen chicks. Scientific Reports 13(1), 6178.

Laying hens are typically moved to a novel environment after rearing, requiring adaptability to cope with change. We hypothesized that the standard rearing of laying hen chicks, in non-changing environments with limited choices (a single...

Sokołowicz, Z., Dykiel, M., Topczewska, J. et al. 2023. A comparison of the plumage condition of three egg-laying poultry genotypes housed in non-cage systems. Animals 13(2), 185.

The study covered a total of 810 hens in 3 groups (housing systems) of 270 hens each. The plumage condition of laying hens raised in various types of alternative housing systems, i.e., in deep litter...

Zieliński, D. 2023. The effect of enrichment on leopard geckos (Eublepharis macularius) housed in two different maintenace systems (rack system vs. Terrarium). Animals 13(6), 1111.

The aim of this study was to test the usefulness of environmental enrichment for Eublepharis macularius depending on the maintenance method (terrarium vs. rack system). The hypothesis was that reptiles kept in an extremely low-stimulus...

Deng, J., Zhang, H., Wang, Q. et al. 2023. An optimized environmental DNA method to improve detectability of the endangered Sichuan taimen (Hucho bleekeri). Fishes 8(7), 339.

Environmental DNA (eDNA) techniques have emerged as a cost-effective and non-invasive strategy for monitoring the distribution of endangered aquatic species. Despite their numerous advantages, operational uncertainty at each step of the process represents a significant...

Kastelic, M., Gregurić Gračner, G., Tomažič, I. et al. 2023. Comparison of cortisol concentrations in different matrices in Alpine ibex (Capra ibex) at the zoo. Animals 13(15), 2491.

The usefulness of blood collection using venipuncture versus kissing bugs or medicinal leeches and the collection of saliva, faeces, hair, urine, and tears for measuring “immunoreactive” C (iC) concentration in Alpine ibexes was verified using...

Menard, J., Bagheri, S., Menon, S. et al. 2023. Noninvasive sampling of the small intestinal chyme for microbiome, metabolome and antimicrobial resistance genes in dogs, a proof of concept. Animal Microbiome 5(1), 64.

Background The gastrointestinal microbiome and metabolome vary greatly throughout the different segments of the gastrointestinal tract, however current knowledge of gastrointestinal microbiome and metabolome in health and disease is limited to fecal samples due to...

Montalcini, C. M., Petelle, M. B., Toscano, M. J. 2023. Commercial hatchery practices have long-lasting effects on laying hens’ spatial behaviour and health. PLOS ONE 18(12), e0295560.

The commercial hatchery process is globally standardized and exposes billions of day-old layer chicks to stress every year. By alleviating this early stress, on-farm hatching is thought to improve animal welfare, yet little is known...

Paranjape, V. V., Garcia-Pereira, F. L., Menciotti, G. et al. 2023. Evaluation of electrical cardiometry for measuring cardiac output and derived hemodynamic variables in comparison with lithium dilution in anesthetized dogs. Animals 13(14), 2362.

Numerous cardiac output (CO) technologies were developed to replace the ‘gold standard’ pulmonary artery thermodilution due to its invasiveness and the risks associated with it. Minimally invasive lithium dilution (LiD) shows excellent agreement with thermodilution...

Trębacz, P., Frymus, J., Barteczko, A. et al. 2023. Accuracy of instrument portal placement using a custom-made 3D-printed aiming device versus free hand technique in canine elbow arthroscopy. Animals 13(23), 3592.

While the insertion of the arthroscope into the elbow joint is relatively easy based on anatomical landmarks, obtaining a correctly located instrument portal is often difficult. Therefore, the goal of the study was to create...

Rexroat, E. K., Haughton, C. L., Fox, K. 2023. Using a cost-effective, efficient method to train young dogs to cooperate for multiple blood collection procedures in a pharmacokinetics study. Laboratory Animal Science Professional 11(6) (November/December), 34-36.

Behavioral testing slings, such as the Pavlov sling, offer an effective form of restraint for beagles while minimizing stress. Although these slings provide effective restraint, their high cost makes them less likely to be considered...

Alizadeh, E. A., Graf, K., Schiwon, J. et al. 2023. Thirty years of telemetry-based data acquisition for cardiovascular drug safety evaluation: Applications and optimization. Journal of Pharmacological and Toxicological Methods 122, 107279.

Conducting safety evaluations of new drugs using conscious animals has been a specialty of our working group for thirty years. In this article, we review the various technical challenges and solutions dealt with over the...

Gendron, M. E., Buston, P. M. 2023. Review of housing and husbandry of anemonefishes for use in research. Journal of Fish Biology 103(5), 924–938.

Anemonefishes of the genus Amphiprion are emerging as a model organism for marine science, so there is potentially a lot for the research community to gain by optimizing and standardizing housing and husbandry protocols. Here...

Jones, S. M., Burns, C. C., Reed, R. A. et al. 2023. The effect of adding a heated humidified breathing circuit on body temperature in healthy anesthetized dogs. Journal of the American Veterinary Medical Association 261(8), 1181–1185.

OBJECTIVE To compare the effect of a circulating warm water blanket (WWB) in combination with a heated humidified breathing circuit (HHBC) heated to 45 °C on rectal temperature (RT) in dogs undergoing general anesthesia for...

Martin, A. L., Walthers, C. M., Pattillo, M. J. et al. 2023. Impact of visual barrier removal on the behavior of shelter-housed dogs. Journal of Applied Animal Welfare Science 26(4), 596–606.

With millions of dogs housed in shelters each year, it is important to consider how the shelter environment impacts welfare. Social isolation and a lack of control over the environment can negatively impact wellbeing. However...

Martin-Flores, M., Nugen, S. A., Boesch, J. M. et al. 2023. Low-dose epidural anesthesia decreases the use of intraoperative systemic analgesics in goats undergoing lower urinary tract surgery. Journal of the American Veterinary Medical Association 261(8), 1147–1151.

OBJECTIVE To test whether the use of low-dose epidural anesthesia (EA) in goats undergoing lower urinary tract surgery reduces the requirements of perioperative analgesics, contributes to intraoperative hypotension, and improves postoperative comfort during the first...