Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

FELASA Working Group on Farm Animals: Berset, C. M., Caristo, M. E., Ferrara, F. et al. 2021. Federation of European Laboratory Animal Science Associations recommendations of best practices for the health management of ruminants and pigs used for scientific and educational purposes. Laboratory Animals 55(2), 117-128.

Most ruminants and pigs used for scientific and educational aims are bred not for these purposes but in a farm environment. Given the wide range of diseases that these species might have, ensuring that the...

Schmidt, T., Ferrara, F., Pobloth, A.-M. et al. 2021. Large farm animals used for research purposes: A survey on purchase, housing and hygiene management. Animals 11(8), 2158.

Background: Farm animals (FAs) are frequently used in biomedical research. Recommendations for the purchase, housing and health monitoring of these animals (sheep, goats, cattle and pigs) are still missing, and many institutes have developed their...

Costantino, A., Fabrizio, E., Calvet, S. 2021. The role of climate control in monogastric animal farming: The effects on animal welfare, air emissions, productivity, health, and energy use. Applied Sciences 11(20), 9549.

In the last decades, an engineering process has deeply transformed livestock houses by introducing fine-tuned climate control systems to guarantee adequate indoor climate conditions needed to express the maximum genetic potential of animals and to...

Crailsheim, D., Stüger, H., P., Kalcher-Sommersguter, E. et al. 2020. Early life experience and alterations of group composition shape the social grooming networks of former pet and entertainment chimpanzees (Pan troglodytes). PLOS ONE 15(1), e0226947.

The long-term effects of early life adversities on social capacities have been documented in humans and wild-caught former laboratory chimpanzees (Pan troglodytes). However, former pet and entertainment chimpanzees have received little attention to date. This...

Vittis, Y., Kaler, J. 2020. Environmental and field characteristics associated with lameness in sheep: A study using a smartphone lameness app for data recording. Veterinary Record 186(12), 384.

Sheep lameness is a major concern among farmers and policymakers with significant impacts on animal welfare standards as well as financial and production performance. The present study attempts to identify the relative importance of environmental...

Piirsalu, P., Kaart, T., Nutt, I. et al. 2020. The effect of climate parameters on sheep preferences for outdoors or indoors at low ambient temperatures. Animals 10(6), 1029.

Threshold temperatures for cold stress in sheep are not well understood, the available literature is somewhat dated and reports relate to winter temperatures that are relatively benign. Sheep’s preferences for outdoor versus indoor environments, when...

Mondragón-Ancelmo, J., García Hernández, P., Rojo Rubio, R. et al. 2020. Small flocks show higher levels of welfare in Mexican semi-intensive sheep farming systems. Journal of Applied Animal Welfare Science 23(3), 348-355.

In order to assess the level of sheep welfare in small traditional farms as compared with farms of increased size we evaluated several animal-based parameters and applied a modified Animal Needs Index (ANI) protocol in...

De, K., Sharma, S., Kumar Kumawat, P. et al. 2020. Provision of desert cooler in shed of ewes during summer in hot semi-arid region. Journal of Veterinary Behavior 37, 76-80.

In hot arid and semi-arid regions, heat stress is a major constraint in animal production due to prolonged summers with high temperatures. In dairy husbandry, the desert cooler and evaporative cooling system are effectively used...

Wang, R., Liu, R., Li, L. et al. 2020. Fasting is not required for measuring plasma lipid levels in rabbits. Laboratory Animals 54(3), 272–280.

Plasma lipid and glucose levels are important parameters for evaluating the onset and development of metabolic and cardiovascular diseases. In clinical and experimental studies of humans or mice, fasting is often required before testing plasma...

Beck, M. R., Gregorini, P. 2020. How dietary diversity enhances hedonic and eudaimonic well-being in grazing ruminants. Frontiers in Veterinary Science 7, 191.

Ruminants evolved in diverse landscapes of which they utilized, by choice, a diverse arrangement of plants (grasses, forbs, and trees) for food. These plants provide them with both primary (carbohydrates, protein, etc.) and secondary (phenolics...

McMahon, S. A., Wigham, E. 2020. ‘All Ears’: A questionnaire of 1516 owner perceptions of the mental abilities of pet rabbits, subsequent resource provision, and the effect on welfare. Animals 10(10), 1730.

Pet rabbit welfare is a hidden crisis: Inappropriately housed, fed, and not routinely provided healthcare—rabbits can often suffer painful conditions and shortened lifespans. This study provides novel understanding of owners’ perceptions of rabbits’ mental capabilities...

Murai, T., Sukoff Rizzo, S. J. 2020. The importance of complementary collaboration of researchers, veterinarians, and husbandry staff in the successful training of marmoset behavioral assays. ILAR Journal 61(2-3), 230-247.

Interest in marmosets as research models has seen exponential growth over the last decade, especially given that the research community is eager to improve on gaps with historical animal models for behavioral and cognitive disorders...

Boesch, C. 2020. Mothers, environment, and ontogeny affect cognition. Animal Behavior and Cognition 7(3), 474–489.

The book “Folk Physics for Apes” remains a fascinating book about the way one captive peer-group of chimpanzees understand the world in which they grew. However, the very special living conditions these seven individuals faced...

Sadeghi, M.-H., Sari, M., Mohammadabadi, T. et al. 2019. Effect of a short-term training on intake of Halocnemum strobilaceum forage by sheep. Applied Animal Behaviour Science 213, 74-80.

Halocnemum strobilaceum (Chenopodiaceae) is a halophyte plant that can produce relatively high consumable biomass during drought and it is important for sustaining grazing animals when other plants are rare. Previous studies indicate that sheep may...

Stellato, A. C., Hoffman, H., Gowland, S. et al. 2019. Effect of high levels of background noise on dog responses to a routine physical examination in a veterinary setting. Applied Animal Behaviour Science 214, 64-71.

Veterinary visits result in behavioural and physiological signs of fear and stress for many companion dogs. There are a number of factors that likely contribute to this response, but little is known about possible effects...

Arena, L., Berteselli, G. V., Lombardo, F. et al. 2019. Application of a welfare assessment tool (Shelter Quality Protocol) in 64 Italian long-term dogs' shelters: Welfare hazard analysis. Animal Welfare 28(3), 353-363.

The confined environment of the dog shelter, particularly over extensive time-periods can impact severely on welfare. Surveillance and assessment are therefore essential components of the welfare protocol. The aim of this study was to generate...

Stevens, C., Hawkins, P., Lovell-Badge, R. et al. 2019. Report of the 2018 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 18(2), 81-91.

The RSPCA/UFAW Rodent (and now Rabbit) Working Group has held a one-day meeting every autumn for the last 25 years, so that its members can discuss current welfare research, exchange views on welfare issues and...

Costa, J. H. C., Cantor, M. C., Adderley, N. A. et al. 2019. Key animal welfare issues in commercially raised dairy calves: social environment, nutrition, and painful procedures. Canadian Journal of Animal Science 99(4), 649-660.

Dairy calf welfare concerns are growing and new evidence suggests that the early life environment influences appropriate physical, behavioral, and cognitive development lasting into adulthood. This review highlights key evidence for the impacts of housing...

Bloomsmith, M. A., Clay, A. W., Lambeth, S. P. et al. 2019. Survey of behavioral indices of welfare in research chimpanzees (Pan troglodytes) in the United States. JAALAS 58(2), 160-177.

Chimpanzees demand specialized housing and care and the highest degree of attention to animal welfare. The current project used a survey method to collate information on chimpanzee housing and behavioral indices of welfare across all...

De, K., Kumar, D., Mohapatra, A. et al. 2019. Effect of bedding for reducing the postshearing stress in sheep. Journal of Veterinary Behavior 33, 27-30.

Shearing of sheep is routine management. However, the shearing induces stress in the animal. To reduce the postshearing stress, providing bedding may be an effective method. Therefore, the present study was initiated to assess the...

Buckley, L. A., Whalley, C. 2019. The use of synthetic grass as a novel substrate within veterinary practice canine inpatient elimination enclosures. Journal of Veterinary Behavior 34, 42-51.

Dogs form toileting preferences that may influence canine elimination behaviors. This study aimed to assess the effect of providing a novel substrate (synthetic grass) on indices of canine willingness to eliminate, plus associated behavioral parameters...

Marinath, L., Vaz, J., Kumar, D. et al. 2019. Drivers of stereotypic behaviour and physiological stress among captive jungle cat (Felis chaus Schreber, 1777) in India. Physiology & Behavior 210, 112651.

Zoos play a vital role in managing and conserving a wide range of threatened species and in enhancing their populations in natural habitats through captive breeding and reintroduction programmes. Most small felids are poor breeders...

Cox, R. J., Nol, P., Ellis, C. K. et al. 2019. Research with agricultural animals and wildlife. ILAR Journal 60(1), 66-73.

In fiscal year 2016, agricultural animals such as swine, sheep, goats, and cattle represented 10% of the 820 812 animals used in USDA-regulated research. In addition to traditional agricultural animals, research studies using captive wildlife...

Höttges, N., Hjelm, M., Hård, T. et al. 2019. How does feeding regime affect behaviour and activity in captive African lions (Panthera leo)? Journal of Zoo and Aquarium Research 7(3), 117-125.

Lions (Panthera leo) are popular zoo animals and obligate carnivores. In the past, zoos focused on the nutritional aspect of feeding, whereas today they aim to encourage naturalistic feeding. AZA’s Lion Care Manual recommends a...