Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Lambert, H., Cornish, A., Waley, D. 2024. The value of regulating stocking densities in aquaculture must not be dismissed: A reply to Saraiva et al. 2022. Frontiers in Veterinary Science 10.

We would like to rebut the argument made by Saraiva et al. (1) in their paper “Finding the “golden stocking density”: a balance between fish welfare and farmers' perspectives,” that stocking densities should not be...

Alig, B. N., Ferket, P. R., Malheiros, R. D. et al. 2023. The effect of housing environment on commercial brown egg layer production, USDA grade and USDA size distribution. Animals 13(4), 694

Consumer demand for retail cage-free eggs is driving the layer industry towards greater use of extensive housing environments. However, there is limited research on how these environments affect egg production characteristics of brown egg layers...

Corsetti, S., Natoli, E., Palme, R. et al. 2023. Instraspecific interactions decrease stress affecting welfare in shelter dogs: A comparison of four different housing conditions. Animals 13(11), 1828.

Shelters are stressful environments for domestic dogs (Canis familiaris). Evaluating dogs’ welfare is crucial to improve their life condition and to promote a better management of shelters. We aimed at verifying which variables improved welfare...

Delank, K., Reese, S., Erhard, M. et al. 2023. Behavioral and hormonal assessment of stress in foals (Equus caballus) throughout the weaning process. PLOS ONE 18(1), e0280078.

This study had the aim to demonstrate the midterm effects (three weeks) of weaning on foals’ welfare. For this purpose, foals’ behavioral changes and fecal levels metabolites of cortisol were evaluated. The observations took place...

Diao, W., Jia, R., Hou, Y. et al. 2023. Effects of stocking density on the growth performance, physiological parameters, antioxidant status and lipid metabolism of Pelteobagrus fulvidraco in the integrated rice-fish farming system. Animals 13(11), 1721.

Pelteobagrus fulvidraco is a freshwater fish commonly raised in rice fields, yet the optimal stocking density for this species remains unknown. Therefore, this study aimed to investigate the appropriate stocking density of P. fulvidraco in...

Dong, Y., Fraley, G. S., Siegford, J. M. et al. 2023. Comparing different environmental enrichments for improving the welfare and walking ability of male turkeys. PLOS ONE 18(5), e0285347.

This study investigated age-related changes in turkey welfare measures (wounds, feather quality (FQ), feather cleanliness, and footpad condition (FCON)) and walking ability (gait) as influenced by different types of environmental enrichment (EE). Tom turkeys (n...

Evans, L., Brooks, G. C., Anderson, M. G. et al. 2023. Environmental complexity and reduced stocking density promote positive behavioral outcomes in broiler chickens. Animals 13(13), 2074.

The objective was to evaluate the impacts of a complex environment and stocking density on Ross 708 broiler chicken behaviors. Eight pens contained either high complexity (HC) or low complexity (LC) environments, and high (HD)...

Hube, D., Bill, J., Knop, E. S. et al. 2023. Physical injuries and hair corticosterone concentration in rabbit kits from single- and group-housed does kept on a commercial farm. Animals 13(2), 196.

In intense breeding programs, rabbits are exposed to numerous stress factors which could affect their welfare and health. It has been suggested that group housing is more comfortable for does and similar to the living...

Kaiser, S., Korte, A., Wistuba, J. et al. 2023. Effects of castration and sterilization on baseline and response levels of cortisol—A case study in male guinea pigs. Frontiers in Veterinary Science 9, 1093157.

An uncontrolled reproduction of animals in human hands should be avoided. To meet this goal, animals are widely castrated, i.e., the gonads are completely removed. Since the gonads are the most important source of sex...

Kleinhappel, T. K., Pike, T. W., Burman, O. H. P. 2023. Changes in group behaviour in response to a preferred environment reflect positive affect. Scientific Reports 13(1), 10576.

When observed in their preferred environments, animals display behavioural changes, such as an increase in resting or a reduction in agonism, suggestive of positive affect and improved welfare. However, most studies focus on the behaviour...

Krunt, O., Zita, L., Kraus, A. et al. 2023. Effects of genotype and housing system on rabbit does’ aggressive behaviors and injuries in smallholding conditions. Animals 13(8), 1357.

The objective of the study was to investigate the effects of housing (deep litter + concrete floor vs. deep litter + ground soil with the possibility to dig burrows), and genotype (Mecklenburg or Hyplus) on...

Lee, G.-H., Jo, W., Kang, T.-K. et al. 2023. Assessment of stress caused by environmental changes for improving the welfare of laboratory beagle dogs. Animals 13(6), 1095.

Animal stress is influenced by environmental factors, yet only a few studies have evaluated the effects of environmental stress on captive dogs. This study aimed to evaluate the effects of environmental and social enrichment on...

Moise, R. I., Eccles, G. R., Mettke-Hofmann, C. 2023. Enclosure background preferences differ between sexes and color morphs in the Gouldian finch. Animals 13(8), 1353.

Most wild animals camouflage well into their environment, providing protection from predators, whereas captive animals often contrast with their background. This can cause stress for the animal, which may perceive it as being exposed. Theory...

Morgado, J. N., Lamonaca, E., Santeramo, F. G. et al. 2023. Effects of management strategies on animal welfare and productivity under heat stress: A synthesis. Frontiers in Veterinary Science 10, 1145610.

Climate change includes different dramatic events, and among them, heat stress exposition is the strongest phenomenon affecting the livestock sector. The effects of heat stress events on animal welfare are complex and the economic impacts...

Novák, J., Frynta, D., Nováková, D. et al. 2023. Social deprivation in maternal mouthbrooders Tropheus sp. “Caramba” (Teleostei: Cichlidae) decreases the success rate of reproduction and survival rate of fish fry. Scientific Reports 13(1), 8284.

Early offspring separation from mothers causes social deprivation. Mouthbrooding, when eggs and fry are incubated in the buccal cavity of the parent, is one of the reproductive strategies in fish. The mother is the incubating...

Paneru, B., Pent, G. J., Nastasi, S. et al. 2023. Effect of silvopasture system on fearfulness and leg health in fast-growing broiler chickens. PLOS ONE 18(3), e0282923.

A silvopasture system intentionally integrates trees, forages, and livestock, allowing dual land use. These systems can provide high-quality habitat for broiler chickens; however, such systems have not been widely adopted by the broiler industry in...

Pereira, E., Nääs, I. de A., Ivale, A. H. et al. 2023. Energy assessment from broiler chicks’ vocalization might help improve welfare and production. Animals 13(1), 15.

Vocalization seems to be a viable source of signal for assessing broiler welfare. However, it may require an understanding of the birds’ signals, both quantitatively and qualitatively. The delivery of calls with a specific set...

Scatterty, K. R., Pitman, T., Eckersley, T. et al. 2023. Zebrafish aversion to infrasound in an open field test. Frontiers in Behavioral Neuroscience 16, 1019368.

Aquatic species are capable of detecting infrasound (sub-20 Hz frequencies) which may be a source of anthropogenic pollution and have a detrimental impact on the environmental fitness of fish. Infrasound is generated by infrastructure, producing...

Sen Sarma, O., Frymus, N., Axling, F. et al. 2023. Optimizing zebrafish rearing−Effects of fish density and environmental enrichment. Frontiers in Behavioral Neuroscience 17, 1204021.

Despite its popularity in research, there is very little scientifically validated knowledge about the best practices on zebrafish (Danio rerio) husbandry, which has led to several facilities having their own husbandry protocols. This study was...

Skånberg, L., Newberry, R. C., Estevez, I. et al. 2023. Environmental change or choice during early rearing improves behavioural adaptability in laying hen chicks. Scientific Reports 13(1), 6178.

Laying hens are typically moved to a novel environment after rearing, requiring adaptability to cope with change. We hypothesized that the standard rearing of laying hen chicks, in non-changing environments with limited choices (a single...

Sokołowicz, Z., Dykiel, M., Topczewska, J. et al. 2023. A comparison of the plumage condition of three egg-laying poultry genotypes housed in non-cage systems. Animals 13(2), 185.

The study covered a total of 810 hens in 3 groups (housing systems) of 270 hens each. The plumage condition of laying hens raised in various types of alternative housing systems, i.e., in deep litter...

Rooney, N. J., Baker, P. E., Blackwell, E.-J. et al. 2023. Run access, hutch size and time-of-day affect welfare-relevant behaviour and faecal corticosterone in pair-housed pet rabbits. Applied Animal Behaviour Science 262, 105919.

Although there exist several studies examining the housing needs of rabbits kept in laboratories and for meat, studies of the requirements of pet rabbits are few and focus entirely on single rabbits. Pet rabbits are...

Baßmann, B., Hahn, L., Rebl, A. et al. 2023. Effects of stocking density, size, and external stress on growth and welfare of African catfish (Clarias gariepinus Burchell, 1822) in a commercial RAS. Fishes 8(2), 74.

The effects of semi-intensive (100 kg m−3), intensive (200 kg m−3), and super-intensive (400 kg m−3) stocking densities on the growth and welfare of African catfish (Clarias gariepinus) were investigated under commercial production conditions. Plasma...

Fontana, B. D., Alnassar, N., Parker, M. O. 2023. Transgenerational effects of early-life stress on anxiety behavior in zebrafish (Danio rerio). Behavioural Processes 208, 104874.

Early-life adversity impacts on anxiety-related behaviors in adulthood. The effects of such adversity not only affect the animal itself, but can be passed on transgenerationally. Pervasive effects of experimentally-induced early-life stress (ELS) have been documented...

Gauy, A. C. dos S., Bolognesi, M. C., Gonçalves-de-Freitas, E. 2023. Body tactile stimulation reduces the effects of high stocking density on the welfare of Nile tilapia (Oreochromis niloticus). Fishes 8(6), 320.

High stocking density is used in aquaculture to optimize farming. However, such strategies can stress territorial fish by increasing aggression, thus harming the fish welfare and productive performance. Here, we tested the effect of long-term...