Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Alejandro, J., Yamanashi, Y., Nemoto, K. et al. 2023. Reducing stress and stereotypic behaviors in captive female pygmy slow lorises (Nycticebus pygmeaus). American Journal of Primatology 85(7), e23495.

Improving captive conditions of pygmy slow lorises (Nekaris and Nijman have recently suggested that the pygmy slow loris should be called the pygmy loris and is distinctive enough to warrant a new genus, Xanthonycticebu) (Nycticebus...

Baxter, A., Lau, A. R., Savidge, L. E. et al. 2023. Initial compatibility during a “Speed-Dating” test predicts postpairing affiliation in titi monkeys (Plecturocebus cupreus). American Journal of Primatology 85(7), e23496.

Behavioral compatibility plays a critical role in shaping how potential mates interact with and evaluate each other and whether they choose to pursue a relationship. Compatibility is especially important for mate choice and relationship quality...

Nicolis, I. N., Beale, C. N., Bidot, W. A. et al. 2022. Performance and consistency of circulating warm water blankets for rodents. JAALAS 61(1), 96-100.

General anesthesia as used for rodent research can have adverse effects on physiologic mechanisms. Thermoregulation is often greatly inhibited, with resultant deleterious effects on cardiac and respiratory function. These potential effects can be mitigated by...

Schilling, A.-K., Mazzamuto, M. V., Romeo, C. 2022. A review of non-invasive sampling in wildlife disease and health research: What’s new? Animals 12(13), 1719.

In the last decades, wildlife diseases and the health status of animal populations have gained increasing attention from the scientific community as part of a One Health framework. Furthermore, the need for non-invasive sampling methods...

Lee, V. E., Arnott, G., Turner, S. P. 2022. Social behavior in farm animals: Applying fundamental theory to improve animal welfare. Frontiers in Veterinary Science 9, 932217.

A fundamental understanding of behavior is essential to improving the welfare of billions of farm animals around the world. Despite living in an environment managed by humans, farm animals are still capable of making important...

Yamanashi, Y., Nemoto, K., Alejandro, J. 2021. Social relationships among captive male pygmy slow lorises (Nycticebus pygmaeus): Is forming male same-sex pairs a feasible management strategy? American Journal of Primatology 83, e23233.

Little is known about the social behavior of pygmy slow lorises, in particular, the social relationships of same‐sex individuals have rarely been investigated. The Slow Loris Conservation Center was built at the Japan Monkey Center...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Alejandro, J., Yamanashi, Y., Nemoto, K. et al. 2021. Behavioral changes of solitary housed female pygmy slow lorises (Nycticebus pygmeaus) after introduction into group enclosures. Animals 11(9), 2751.

Pygmy slow lorises (Nycticebus pygmaeus) are threatened with extinction in the wild. Their nocturnal lifestyle and small size make them difficult to study in their natural habitat, but increasing evidence suggests that they are more...

Bwye, P. 2021. Social distancing is over: A pygmy slow loris trio housed together at Bristol Zoo Gardens. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 48(3), 15-17.

After the loss of one of our breeding males and the export of loris offspring, in 2021 our off-show female loris was solitary. During this time, we noticed a number of changes in this female...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Skinner, M., Miller, N. 2020. Aggregation and social interaction in garter snakes (Thamnophis sirtalis sirtalis). Behavioral Ecology and Sociobiology 74, 51.

Previous research has shown that competition, familiarity, diet, and relatedness can all influence aggregation patterns in garter snakes. We controlled for these factors and examined social aggregation patterns in juvenile Eastern garter snakes (Thamnophis sirtalis...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

LaFleur, R. A., Williams-Fritze, M. J. 2020. Now hear this: Caring for chinchillas in research. Laboratory Animal Science Professional 8(5) (September/October), 8-12.

This article describes the authors’ experience with the housing, social housing, husbandry, handling, and environmental enrichment of chinchillas in laboratories.

Rothwell, E. S., Carp, S. B., Savidge, L. E. et al. 2020. Relationship tenure differentially influences pair-bond behavior in male and female socially monogamous titi monkeys (Callicebus cupreus). American Journal of Primatology 82(10), e23181.

Pair-bonded primates have uniquely enduring relationships and partners engage in a suite of behaviors to maintain these close bonds. In titi monkeys, pair bond formation has been extensively studied, but changes across relationship tenure remain...

Price, E., Coleman, R., Ahsmann, J., et al. 2019. Individual, social and environmental factors affecting salivary and fecal cortisol levels in captive pied tamarins (Saguinus bicolor). American Journal of Primatology 81(8), e23033.

Pied tamarins (Saguinus bicolor) are endangered New World primates, and in captivity appear to be very susceptible to stress. We measured cortisol in 214 saliva samples from 36 tamarins and in 227 fecal samples from...

Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ Position Statement: Cerebrospinal fluid aspiration for nonhuman primates in biomedical research. JAALAS 58(4), 428-429.

The Association of Primate Veterinarians (APV) recognizes that CSF collection may be required for both clinical and research purposes in nonhuman primates (NHP). Because there are inherent risks associated with the technique, the laboratory animal...

Sánchez–Hernández, P., Krasheninnikova, A., Almunia, J. et al. 2019. Social interaction analysis in captive orcas (Orcinus orca). Zoo Biology 38(4), 323-333.

The management of socially complex species in captivity is challenging. Research on their social behavior improves our understanding of interactions in captive animals and captive-group management. We conducted a detailed analysis of social relationships shown...

Leeds, A., Lukas, K. E. 2019. Monitoring the social behavior of a bachelor mandrill (Mandrillus sphinx) dyad participating in touchscreen-mediated cognitive testing. Zoo Biology 38(4), 397-402.

Cognitive testing of primates in zoos is becoming increasingly common. Cognition experiments are generally thought to be beneficial as they provide participants with an opportunity to engage in species-specific cognitive functioning, perhaps more so than...

Coke, C., Skoumbourdis, E., Rodgers, J. C. et al. 2018. Blunting/cutting canines of adult male monkeys: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology & Welfare 17(2), 105-107.

"When you keep adult Rhesus macaque (Macaca mulatta) males, adult Cynomolgus (Macaca fascicularis) males or adult Vervet males (Chlorocebus pygerythrus), in the same enclosure, is it advisable to have the canines of the males blunted...

Harvey, B. S., Dudzinski, K. M., Kuczaj, S. A. 2017. Associations and the role of affiliative, agonistic, and socio-sexual behaviors among common bottlenose dolphins (Tursiops truncatus). Behavioural Processes 135, 145-156.

Little is known about the specific behavioral exchanges that occur on a day-to-day basis between dyads of common bottlenose dolphins (Tursiops truncatus). This study assesses the proportion of time dyads spend in proximity (within ∼2...

Clegg, I. L., Rödel, H. G., Delfour, F. 2017. Bottlenose dolphins engaging in more social affiliative behaviour judge ambiguous cues more optimistically. Behavioural Brain Research 322, 115-122.

Cognitive bias tests measure variation in emotional appraisal and are validated methods to assess animals’ affective states. However, the link between social behaviours and cognitive bias has not yet been investigated. Bottlenose dolphins are a...

Sands, C., Evans, C., Buckmaster, C. A. 2017. The grooming sleeve: Encouraging conspecific-like behavior and strengthening the human-animal bond. Laboratory Animal Science Professional 5(2) (June), 52-53.

The act of grooming has been found to greatly decrease stress, heart rate, and cortisol levels in nonhuman primates; this decrease in stress and cortisol is seen in the animal being groomed, as well as...

Caron, A., Lelong, C., Pascual, M. H. et al. 2015. Miniaturized blood sampling techniques to benefit reduction in mice and refinement in nonhuman primates: Application to bioanalysis in toxicity studies with antibody-drug conjugates. JAALAS 54(2), 145-152.

Minimizing the number of animals in regulatory toxicity studies while achieving study objectives to support the development of future medicines contributes to good scientific and ethical practices. Recent advances in technology have enabled the development...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Cikanek, S. J., Nockold, S., Brown, J. L. et al. 2014. Evaluating group housing strategies for the ex-situ conservation of harlequin frogs (Atelopus spp) using behavioral and physiological indicators. PLOS ONE 9(2), e90218.

We have established ex situ assurance colonies of two endangered Panamanian harlequin frogs, Atelopus certus and Atelopus glyphus, but observed that males fought with each other when housed as a group. Housing frogs individually eliminated...