Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every three months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Links to the full text for publications that appear in open access journals or are published on the AWI website are provided under the abstract.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic. Most publications older than 2010 can only be searched by keyword. 
Arfuso, F., Acri, G., Piccione, G. et al. 2022. Eye surface infrared thermography usefulness as a noninvasive method of measuring stress response in sheep during shearing: Correlations with serum cortisol and rectal temperature values. Physiology & Behavior 250, 113781.
During shearing, animals’ welfare is adversely affected and acute stress occurs. Once animal perceives a threat, it develops behavioral, autonomic, endocrine or immune responses to maintain homeostasis. This study aimed to investigate the usefulness of...
Spitzer, H. B., Meagher, R. K., Proudfoot, K. L. 2022. The impact of providing hiding spaces to farmed animals: A scoping review. PLoS ONE 17(11), e0277665.
Many wild animals perform hiding behaviours for a variety of reasons, such as evading predators or other conspecifics. Unlike their wild counterparts, farmed animals often live in relatively barren environments without the opportunity to hide...
Chmurska-Gąsowska, M., Sowińska, N., Pałka, S. et al. 2021. Non-invasive measurement of thyroid hormones in domestic rabbits. Animals 11(5), 1194.
Thyroid hormones are essential for metabolism, energy homeostasis and reproduction. Hormones can be measured in various biological source materials: blood, feces, urine, saliva and others. The aim of our study was to verify usefulness of...
Spiezio C., Vaglio, S., Vandelle C. et al. 2021. Effects of rearing on the behaviour of zoo-housed chimpanzees (Pan troglodytes). Folia Primatologica 92(2), 91–102.
Early-life experiences may considerably affect the behavioural patterns of adult primates. Particularly, atypical rearing practices might lead to abnormal behaviours and social-sexual deficiencies in captive, adult non-human primates. We conducted behavioural observations of mother-reared (n...
Wilson-Welder, J. H., Frank, A. T. 2021. Use of food enrichment for medication delivery in large groups of sheep. Laboratory Animal Science Professional 9(3) (May/June), 40-43.
In a 2018 AALAS webinar on Sheep and Goat Analgesia, Dr. Susie Vogel, a small ruminant expert, introduced the concept of getting sheep and goats to willingly take medication by putting it in a tasty...
Ross, S. R., Lake, B. R., Fultz, A. et al. 2021. An evaluation of thermal imaging as a welfare monitoring tool for captive chimpanzees. Primates 62(6), 919-927.
Among the growing list of novel tools with which to assess animal welfare is the use of thermal (infrared) imaging. The technology has already been utilized to identify emotional arousal in several nonhuman primate species...
Edes, A. N., Brand, C. M. 2021. Age, sex, and inflammatory markers predict chronic conditions, cardiac disease, and mortality among captive western lowland gorillas (Gorilla gorilla gorilla). Primates 62(6), 931-943.
In humans, inflammatory markers predict health risks. As great apes experience many similar conditions, measuring inflammation may provide valuable health information. We examined four serum inflammatory markers in zoo-housed gorillas (n = 48): albumin, CRP, IL-6, and...
Byrnes, E. E., Lear, K. O., Morgan, D. L. et al. 2020. Respirometer in a box: Development and use of a portable field respirometer for estimating oxygen consumption of large‐bodied fishes. Journal of Fish Biology 96(4), 1045-1050.
Respirometry has become the standard method for measuring the metabolic rate of fishes. Traditionally, respirometry has required the fish to be kept in captivity and tested under controlled conditions; however, many species do not readily...
Sutherland, M. A., Worth, G. M., Dowling, S. K. et al. 2020. Evaluation of infrared thermography as a non-invasive method of measuring the autonomic nervous response in sheep. PLoS ONE 15(5): e0233558.
Eye temperature measured using infrared thermography (IRT) can be used as a non-invasive measure of autonomic nervous system (ANS) activity in cattle. The objective of this study was to evaluate if changes in eye temperature...
Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.
This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...
Cloutier Barbour, C., Danforth, M. D., Murphy, H. et al. 2020. Monitoring great ape heart health through innovative electrocardiogram technology: Training methodologies and welfare implications. Zoo Biology 39(6), 443-447.
Assessing and treating cardiovascular disease (or heart disease) is a growing concern for institutions housing great apes, as it is a major cause of mortality in all four taxa managed in human care. As part...
Freitas-de-Melo, A., Ungerfeld, R. 2020. The sex of the offspring affects the lamb and ewe responses to abrupt weaning. Applied Animal Behaviour Science 229, 105008.
Female lambs have a stronger attachment with their mothers and show a greater susceptibility to stressors than male lambs. Male lambs grow faster than female lambs do, achieving a greater nutritional independence from their mothers...
Munari, C., Ponzio, P., Macchi, E. et al. 2020. A multifactorial evaluation of different reproductive rhythms and housing systems for improving welfare in rabbit does. Applied Animal Behaviour Science 230, 105047.
The most widespread reproductive rhythm practiced in rabbit farming is based on artificial insemination (AI) performed at around 11 days pospartum. This approach results in high production rates, but requires high yearly replacement of animals...
McKenzie, D. J., Sadoul, B., Geffroy, B. 2019. Measuring cortisol, the major stress hormone in fishes. Journal of Fish Biology 94(4), 540-555.
Stress in teleosts is an increasingly studied topic because of its interaction with growth, reproduction, immune system and ultimately fitness of the animal. Whether it is for evaluating welfare in aquaculture, adaptive capacities in fish...
Sawyer, G., Webster, D., Narayan, E. 2019. Measuring wool cortisol and progesterone levels in breeding maiden Australian merino sheep (Ovis aries). PLoS ONE 14(4), e0214734.
Hormonal assessment tools are important for determining the reproductive success of production animals. This study used non-invasive wool assessment to quantify changes in progesterone and cortisol levels in reproducing female merino sheep. Wool samples were...
Hawkins, P., McBride, A., Paiba, G. et al. 2018. Report of the 2017 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 17(2), 75-83. [Meeting Report]
The RSPCA/UFAW Rodent (and now Rabbit) Welfare Group held a one-day meeting on 14 November 2017 in Weybridge, UK. The first session addressed meeting animals' needs and aiming for a 'good life', with the needs...
Cannas, S., Palestrini, C., Canali, E. et al. 2018. Thermography as a non-invasive measure of stress and fear of humans in sheep. Animals 8(9), 146.
No data have been published on the use of infrared thermography (IRT) to evaluate sheep emotions. We assessed whether this technique can be used as a non-invasive measure of negative emotions. Two voluntary animal approach...
Fuller, G., Allard, S. 2018. Preliminary data showing potential for salivary C-reactive protein as an indicator of welfare in western lowland gorillas (Gorilla gorilla gorilla). Journal of Veterinary Behavior 28, 58-62.
C-reactive protein (CRP) is an acute phase protein often used as a biomarker for inflammation related to acute trauma or chronic illness. Animal studies showing elevations in CRP following events such as road transport and...
Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLoS ONE 13(8), e0202581.
For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...
Burton, D., Burton, M. (Eds). 2017. Essential Fish Biology: Diversity, Structure and Function. Oxford University Press: Oxford, U.K., 448 pp.
This book summarizes the basic features of living fish. It is introduced by a chapter on the diversity of a group which has over 30,000 species, the largest within the vertebrates, describing the classification systems...
Carter, C. L, Adams, J. K., Czarra, J. A. et al. 2016. An incidence of pseudopregnancy associated with the social enrichment of rabbits (Oryctolagus cuniculi). JAALAS 55(1), 98-99.
Here we describe a case of pseudopregnancy in a New Zealand White rabbit as a result of pair housing with an aggressive conspecific. Clinical signs included fur pulling and nest building that developed shortly after...
Wallace, P. Y., Asa, C. S., Agnew, M. et al. 2016. A review of population control methods in captive-housed primates. Animal Welfare 25(1), 7-20.
The success of breeding primates in captivity has led to a surplus number of animals in collections. This review examines published journals and key books to investigate the various methods of primate population control. Hormonal...
Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.
This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...
Andrist, C. A., Bigler, L. M., Wurbel, H. W. et al. 2012. Effects of group stability on aggression, stress and injuries in breeding rabbits. Applied Animal Behaviour Science 142(3-4), 182-188.
On Swiss rabbit breeding farms, group-housed does are usually kept singly for 12 days around parturition to avoid pseudogravidity, double litters and deleterious fighting for nests. After this isolation phase there is usually an integration...
Merriman, D. K., Lahvis, G., Jooss, M. et al. 2012. Current practices in a captive breeding colony of 13-lined ground squirrels (Ictidomys tridecemlineatus). Lab Animal 41(11), 315-325.
The authors provide an update to their 2006 report on the successful large-scale captive breeding of the 13-lined ground squirrel (TLGS; Ictidomys tridecemlineatus) in their colony, now a single-source supplier of purpose-bred TLGSs for several...

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