Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Cohen, S., Ho, C. 2023. Review of rat (Rattus norvegicus), Mouse (mus musculus), Guinea pig (Cavia procellus), and rabbit (Oryctolagus cuniculus) indicators for welfare assessment. Animals 13(13), 2167.

The monitoring and assessment of animals is important for their health and welfare. The appropriate selection of multiple, validated, and feasible welfare assessment indicators is required to effectively identify compromises or improvements to animal welfare...

Martín, J., Barja, I., Rodríguez-Ruiz, G. et al. 2023. Hidden but potentially stressed: A non-invasive technique to quantify fecal glucocorticoid levels in a fossorial amphisbaenian reptile. Animals 13(1), 109.

To understand wildlife responses to the changing environment, it is useful to examine their physiological responses and particularly their endocrine status. Here, we validated an enzyme immunoassay (EIA) to non-invasively quantify fecal corticosterone metabolites (FCM)...

Robles, I., Luna, S. P. L., Trindade, P. H. E. et al. 2023. Validation of the Unesp-Botucatu pig composite acute pain scale (UPAPS) in piglets undergoing castration. PLOS ONE 18(4), e0284218.

To accurately assess pain and support broadly-based analgesic protocols to mitigate swine pain, it is imperative to develop and validate a species-specific pain scale. The objective of this study was to investigate the clinical validity...

Van Kerschaver, C., Turpin, D., Michiels, J. et al. 2023. Reducing weaning stress in piglets by pre-weaning socialization and gradual separation from the sow: A review. Animals 13(10), 1644.

The weaning of pigs in most commercial pork production systems is an abrupt event performed at a fairly young age, i.e., mostly between 2.5 and 5 weeks of age. This practice induces a stress response...

Franchi, G. A., Larsen, M. L. V., Kristoffersen, I. H. et al. 2023. Play behaviour positively relates to weight gain, feeding behaviour and drinking behaviour in weaner pigs (Sus scrofa). Applied Animal Behaviour Science 259, 105836.

Engagement in play behaviour has been associated with the presence of positive affective states and, thus, proposed to be an indicator of positive animal welfare. However, the interpretation of play in animals remains challenging due...

O’Brien, S. L., Cronin, K. A. 2023. Doing better for understudied species: Evaluation and improvement of a species-general animal welfare assessment tool for zoos. Applied Animal Behaviour Science 264, 105965.

Accredited zoos and aquariums are required to have a welfare assessment process in place for the animals in their care. However, welfare assessment theoretical frameworks and methodologies vary widely. Previous studies have shown that taxonomic...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Campbell-Ward, M. 2023. Quality-of-life assessments in zoo animals: Not just for the aged and charismatic. Animals 13(21), 3394

Zoos should aim to provide all of their animals with a good quality of life (QoL) throughout all life stages. In parallel with the evolution of QoL assessment questionnaires and tools in human and domestic...

Ede, T., Parsons, T. D. 2023. Cognitive tasks as measures of pig welfare: A systematic review. Frontiers in Veterinary Science 10.

Cognitive approaches are increasingly used to assess animal welfare, but no systematic review has been conducted on pigs despite their cognitive capacities. Our aims were two-fold: first, to assess the popularity and heterogeneity of this...

Goma, A. A., Uddin, J., Kieson, E. 2023. Lateralised behavioural responses in livestock to environmental stressors: Implications for using infrared thermography to assess welfare conditions. Animals 13(23), 3663.

Lateralised behavioural responses to environmental stressors have become more frequently used as indicators of social welfare in animals. These lateralised behavioural responses are under the control of asymmetrical brain functions as part of the primary...

Szabo, B., Ringler, E. 2023. Fear of the new? Geckos hesitate to attack novel prey, feed near objects and enter a novel space. Animal Cognition 26(2), 537–549.

Neophobia, the fear of novelty, is an ecologically important response which enables animals to avoid potentially harmful situations. Neophobia is a cognitive process by which individuals distinguish novelty from familiarity. In this study, we aimed...

Zhang, Y., Yu, J., Zhang, Y. et al. 2023. Emotional contagion and social support in pigs with the negative stimulus. Animals 13(20), 3160.

This study expects to confirm the existence of emotional transmission in pigs from multiple perspectives and to provide theoretical references for improving animal welfare in livestock farming. A group that could directly observe (DO) and...

Augustine, L., Baskir, E., Kozlowski, C. P. 2022. Investigating welfare metrics for snakes at the Saint Louis zoo. Animals 12(3), 373.

Modern herpetoculture has seen a rise in welfare-related habitat modifications, although ethologically-informed enclosure design and evidence-based husbandry are lacking. The diversity that exists within snakes complicates standardizing snake welfare assessment tools and evaluation techniques. Utilizing...

Rowe, E., Mullan, S. 2022. Advancing a “good life” for farm animals: Development of resource tier frameworks for on-farm assessment of positive welfare for beef cattle, broiler chicken and pigs. Animals 12(5), 565.

There is increasing recognition that farm animal welfare standards should ensure positive welfare, as well as prevent negative welfare. Resources that are valued by an animal and that provide opportunities to engage in motivated behaviours...

Diggins, R., Burrie, R., Ariel, E. et al. 2022. A review of welfare indicators for sea turtles undergoing rehabilitation, with emphasis on environmental enrichment. Animal Welfare 31(2), 219-230.

For animals undergoing rehabilitation it is vital to monitor welfare in a way that is feasible, practical, and limits stress to the animal. The industry gold standard is to assess welfare under the Five Domains...

Zapata Cardona, J., Ceballos, M. C., Tarazona Morales, A. M. et al. 2022. Music modulates emotional responses in growing pigs. Scientific Reports 12(1), 3382.

There is a lack of clarity on whether pigs can emotionally respond to musical stimulation and whether that response is related to music structure. Qualitative Behavioral Assessment (QBA) was used to evaluate effects of 16...

Zhang, J., Yu, L., Yin, G. 2022. Evaluation of behavior and affective state of different-parity sows with strong/weak pupil light reflex. Animals 12(9), 1184.

The stall-housing system is commonly used in the modern swine industry in many countries; however, long-term space restrictions can cause affective and physiological abnormalities in sows. The pupil light reflex (PLR) can reflect the psychological...

Williams, M. L., Torrini, L. A., Nolan, E. J. et al. 2022. Using classical and operant conditioning to train a shifting behavior in juvenile false water cobras (Hydrodynastes gigas). Animals 12(10), 1229.

All animals have the capacity to learn through operant conditioning and other types of learning, and as a result, zoos and other animal care facilities have shifted towards the use of positive reinforcement training to...

Lou, M. E., Porter, S. T., Massey, J. S. et al. 2022. The application of 3D landmark-based geometric morphometrics towards refinement of the piglet grimace scale. Animals 12(15), 1944.

Proper methods of assessment to objectively identify pain are essential for welfare improvements of piglets undergoing surgical castration on commercial farms. The Piglet Grimace Scale (PGS) is used to identify changes in facial expressions caused...

Drexl, V., Dittrich, I., Haase, A. et al. 2022. Tail posture as an early indicator of tail biting - A comparison of animal and pen level in weaner pigs. Applied Animal Behaviour Science 252, 105654.

The occurrence of tail biting is one of the most important animal welfare problems in pig farming and needs to be recognised early to reduce injuries and suffering. The posture of the tail could be...

Guevara, R. D., Pastor, J. J., Manteca, X. et al. 2022. Systematic review of animal-based indicators to measure thermal, social, and immune-related stress in pigs. PLOS ONE 17(5), e0266524.

The intense nature of pig production has increased the animals’ exposure to stressful conditions, which may be detrimental to their welfare and productivity. Some of the most common sources of stress in pigs are extreme...

Archer, C., Garcia, A., Henderson, M. et al. 2022. Olfactory enrichment using a maternal pheromone improved post-weaning pig performance and behavior. Frontiers in Veterinary Science 9, 965370.

The post-weaning environment in commercial pig nursery buildings is typically devoid of both the sow and her semiochemicals. Among other factors, the loss of maternal odors may contribute to post-weaning stress. In this work, we...

Fischer-Tenhagen, C., Meier, J., Pohl, A. 2022. “Do not look at me like that”: Is the facial expression score reliable and accurate to evaluate pain in large domestic animals? A systematic review. Frontiers in Veterinary Science 9, 1002681.

Facial expression scoring has proven to be useful for pain evaluation in humans. In the last decade, equivalent scales have been developed for various animal species, including large domestic animals. The research question of this...

O’Malley, C. I., Hubley, R., Tambadou, H. et al. 2022. Refining restraint techniques for research pigs through habituation. Frontiers in Veterinary Science 9, 1016414.

Pigs are common research models and are strong animals that can be difficult to restrain. Improper restraint can put pigs and research personnel at risk for injury and induce stress, which can affect research outcomes...

Wood, L. 2022. Managing long-term wellness in captive sea turtles. Animal Welfare 31(4), 423–432.

Circumstances surrounding advances in stranding response and veterinary care have created a growing need for the long-term housing of captive sea turtles. However, the difficulty in recreating natural conditions in captive settings places a responsibility...