Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Fogarty, E. S., Swain, D. L., Cronin, G. M. et al. 2019. A systematic review of the potential uses of on-animal sensors to monitor the welfare of sheep evaluated using the Five Domains Model as a framework. Animal Welfare 28(4), 407-420.

This systematic review explores the use of on-animal sensors in sheep and their potential application in objective welfare monitoring. The key questions posed were: To what extent can current scientific knowledge inform a sensor-based approach...

Sharma, A., Umapathy, G., Kumar, V. et al. 2019. Hair cortisol in sheltered cows and its association with other welfare indicators. Animals 9(5), 248.

India, the country with the largest population of dairy cows in the world, has a policy of retiring abandoned and non-lactating cows in shelters, but the level of provision for their welfare in these shelters...

Mullins, I. L., Truman, C. M., Campler, M. et al. 2019. Validation of a commercial automated body condition scoring system on a commercial dairy farm. Animals 9(6), 287-287.

Body condition scoring (BCS) is the management practice of assessing body reserves of individual animals by visual or tactile estimation of subcutaneous fat and muscle. Both high and low BCS can negatively impact milk production...

Grant, E. P., Wickham, S. L., Anderson, F. et al. 2019. Remote identification of sheep with flystrike using behavioural observations. Animals 9(6), 368.

Flystrike is a major problem affecting sheep in Australia. Identification of 'flystruck' individuals is crucial for treatment; but requires labour-intensive physical examination. As the industry moves toward more low-input systems; there is a need for...

Sharma, A., Phillips, C. J. C. Avoidance distance in sheltered cows and its association with other welfare parameters. Animals 9(7), 396.

The human–animal relationship is an important welfare parameter in animal welfare assessment in cows, and the avoidance distance of cows to a stranger at the feed bunk is measured to assess this relationship. The assessment...

Battini, M., Agostini, A., Mattiello, S. 2019. Understanding cows' emotions on farm: Are eye white and ear posture reliable indicators? Animals 9(8), 477.

Understanding the emotions of dairy cows is primarily important in enhancing the level of welfare and provide a better life on farm. This study explored whether eye white and ear posture can reliably contribute to...

Watters, J. V., Krebs, B. L. 2019. Assessing and enhancing the welfare of animals with equivocal and reliable cues. Animals 9(9), 680.

The actions of human caretakers strongly influence animals living under human care. Here, we consider how intentional and unintentional signals provided by caretakers can inform our assessment of animals' well-being as well as help to...

Brscic, M., Dam Otten, N., Contiero, B. et al. 2019. Investigation of a standardized qualitative behaviour assessment and exploration of potential influencing factors on the emotional state of dairy calves. Animals 9(10), 757.

Assessing emotional states of dairy calves is an essential part of welfare assessment, but standardized protocols are absent. The present study aims at assessing the emotional states of dairy calves and establishing a reliable standard...

Mattiello, S., Battini, M., De Rosa, G. et al. 2019. How can we assess positive welfare in ruminants? Animals 9(10), 758.

Until now, most research has focused on the development of indicators of negative welfare, and relatively few studies provide information on valid, reliable, and feasible indicators addressing positive aspects of animal welfare. However, a lack...

Lawrence, A. B., Vigors, B., Sandøe, P. 2019. What is so positive about positive animal welfare?—A critical review of the literature. Animals 9(10), 783.

It is claimed that positive animal welfare (PAW) developed over the last decade in reaction to animal welfare focusing too much on avoiding negatives. However, it remains unclear what PAW adds to the animal welfare...

Fermo, J. L., Schnaider, M. A., Silva, A. H. P. et al. 2019. Only when it feels good: Specific cat vocalizations other than meowing. Animals 9(11), 878.

Our objective was to identify and characterize the types of vocalization other than meowing (VOM) in two contexts, a pleasant and an aversive situation, and to study the effect of the sex of the animal...

Raillard, M., Detotto, C., Grepper, S. et al. 2019. Anaesthetic and perioperative management of 14 male New Zealand white rabbits for calvarial bone surgery. Animals 9(11), 896.

Calvarial bone surgery on rabbits is frequently performed. This report aims to document a simple and practical anaesthetic and perioperative management for this procedure. Fourteen male New Zealand white rabbits were included in the study...

Carbajal, A., Soler, P., Tallo-Parra, O. et al. 2019. Towards non-invasive methods in measuring fish welfare: The measurement of cortisol concentrations in fish skin mucus as a biomarker of habitat quality. Animals 9(11), 939.

Cortisol levels in fish skin mucus have shown to be good stress indicators in farm fish exposed to different stressors. Its applicability in free-ranging animals subject to long-term environmental stressors though remains to be explored...

Hawkins, P., Bertelsen, T. 2019. 3Rs-related and objective indicators to help assess the culture of care. Animals 9(11), 969.

Within animal research and testing, the need for an effective Culture of Care is widely recognized and described in terms of an establishment-wide commitment to improving the implementation of the 3Rs, animal welfare, scientific quality...

Deeming, L. E., Beausoleil, N. J., Stafford, K. et al. 2019. The development of a hoof conformation assessment for use in dairy goats. Animals 9(11), 973.

The assessment of hoof conformation is important due to its recognized relationship with the biomechanical functionality of the hoof. Hoof conformation can be assessed using objective measures or subjective scores. However, to date, there are...

McLennan, K., Mahmoud, M. 2019. Development of an automated pain facial expression detection system for sheep (Ovis aries). Animals 9(4), 196.

The use of technology to optimize the production and management of each individual animal is becoming key to good farming. There is a need for the real-time systematic detection and control of disease in animals...

McLennan, K. M., Miller, A. L., Dalla Costa, E. et al. 2019. Conceptual and methodological issues relating to pain assessment in mammals: The development and utilisation of pain facial expression scales. Applied Animal Behaviour Science 217, 1-15.

Effective management of pain is critical to the improvement of animal welfare. For this to happen, pain must be recognised and assessed in a variety of contexts. Pain is a complex phenomenon, making reliable, valid...

Lambert, H., Carder, G. 2019. Positive and negative emotions in dairy cows: Can ear postures be used as a measure? Behavioural Processes 158, 172-180.

Applying objective measures to assess the emotional states of animals is an important area of research and essential for improving animal welfare. In this study, we have built upon previous research to test whether ear...

Urrutia, A., Martínez-Byer, S., Szenczi, P. et al. 2019. Stable individual differences in vocalisation and motor activity during acute stress in the domestic cat. Behavioural Processes 165, 58-65.

The behavioural assessment of individual animals in stressful situations should consider measures which are consistent across repeated testing, and therefore truly representative of an individual's behaviour. Here we report a study conducted on 40 neutered...

Bartley, K. A., Johnson, C. H. 2019. Human infant pants for postoperative protection during social housing of New Zealand white rabbits (Oryctolagus cuniculus). JAALAS 58(4), 510-516.

Elizabethan collars (E-collars) are commonly used in various species to safeguard healing wounds. However, E-collars inadvertently restrict the expression of normal species-typical behaviors, including coprophagy, self-grooming, and social housing. To maintain social housing in accordance...

Chatigny, F. 2019. The controversy on fish pain: A veterinarian’s perspective. Journal of Applied Animal Welfare Science 22(4), 400-410.

Fish welfare is still a relatively new field. As such, regulations and protocols to ensure fish welfare are currently limited and vary considerably in different jurisdictions. This is in part because of the ongoing controversy...

ur Rahman, M. A., Xia, C., Ji, L. et al. 2019. Nutrient intake, feeding patterns, and abnormal behavior of growing bulls fed different concentrate levels and a single fiber source (corn stover silage). Journal of Veterinary Behavior 33, 46-53.

Twenty-eight bulls weighing 227 ± 6.8 (SD) kg were randomly assigned to four concentrate levels (1-1.5 kg [low level of concentrate {LC}], 1.5-2 kg [medium level of concentrate], 2-2.5 kg [high level of concentrate {HC}]...

Müller, B. R., Souza Soriano, V., Biscarra Bellio, J. C. et al. 2019. Facial expression of pain in Nellore and crossbred beef cattle. Journal of Veterinary Behavior 34, 60-65.

Although the science of facial expression of pain in humans is advanced, it has not been extensively explored in nonhuman animals. The study of facial expression as an indicator of pain might represent a substantial...

Balansard, I., Cleverley, L., Cutler, K. L. et al. 2019. Revised recommendations for health monitoring of non-human primate colonies (2018): FELASA Working Group Report. Laboratory Animals 53(5), 429–446.

The genetic and biological similarity between non-human primates and humans has ensured the continued use of primates in biomedical research where other species cannot be used. Health-monitoring programmes for non-human primates provide an approach to...

Rifkin, R. E., Grzeskowiak, R. M., Mulon, P-Y. et al. 2019. Use of a pressure-sensing walkway system for biometric assessment of gait characteristics in goats. PLOS ONE 14(10), e0223771.

The purpose of this study was to quantitatively assess gait characteristics and weight-bearing forces during ambulation in goats free of lameness using a pressure-sensing walkway as a biometric tool for stride, gait, and force analysis...