Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Ausderau, K. K., Colman, R. J., Kabakov, S. et al. 2023. Evaluating depression- and anxiety-like behaviors in non-human primates. Frontiers in Behavioral Neuroscience 16, 1006065.

Depression and anxiety are some of the most prevalent and debilitating mental health conditions in humans. They can present on their own or as co-morbidities with other disorders. Like humans, non-human primates (NHPs) can develop...

D’Alessio, R. M., Hanlon, A., O’Driscoll, K. 2023. Comparison of single- and double-spaced feeders with regard to damaging behavior in pigs. Frontiers in Veterinary Science 10, 1073401.

This work compared the behavior and performance of 24 groups of 12 pigs kept in pens with either a DOUBLE [one feed space aligned with the front wall of the pen (WALL), and one immediately...

Deng, J., Zhang, H., Wang, Q. et al. 2023. An optimized environmental DNA method to improve detectability of the endangered Sichuan taimen (Hucho bleekeri). Fishes 8(7), 339.

Environmental DNA (eDNA) techniques have emerged as a cost-effective and non-invasive strategy for monitoring the distribution of endangered aquatic species. Despite their numerous advantages, operational uncertainty at each step of the process represents a significant...

Pan, L., Nian, H., Zhang, R. et al. 2022. Stereotypic behaviors are associated with physiology and immunity differences in long-term confined sows. Physiology & Behavior 249, 113776.

Pregnant sows in the confined environment have poor welfare and frequently perform stereotypic behaviors. In order to clarify whether highly stereotypic behavior is a sign of increased stress and successfully contributes to coping with or...

Lutz, C. K., Coleman, K., Hopper, L.M. et al. 2022. Nonhuman primate abnormal behavior: Etiology, assessment, and treatment. American Journal of Primatology 84(6), e23380.

Across captive settings, nonhuman primates may develop an array of abnormal behaviors including stereotypic and self-injurious behavior. Abnormal behavior can indicate a state of poor welfare, since it is often associated with a suboptimal environment...

Li, S., Hu, H., Huang, J. et al. 2022. Effect of enrichment items on the physiology and behavior of sows in the third trimester of pregnancy. Animals 12(11), 1355.

Modern intensive pig breeding harms animal welfare, which is especially noticeable for pregnant sows kept in confinement stalls. This study aimed to evaluate the effects of enrichment items on the movement and physiological parameters of...

Drexl, V., Dittrich, I., Haase, A. et al. 2022. Tail posture as an early indicator of tail biting - A comparison of animal and pen level in weaner pigs. Applied Animal Behaviour Science 252, 105654.

The occurrence of tail biting is one of the most important animal welfare problems in pig farming and needs to be recognised early to reduce injuries and suffering. The posture of the tail could be...

Thomas, A. D., Orsel, K., Cortés, J. A. et al. 2022. Objective determination and quantification of pain and inflammation associated with digital dermatitis in feedlot cattle. Applied Animal Behaviour Science 253, 105684.

Digital dermatitis (DD) is an infectious skin disease in cattle that causes pain and discomfort, significantly impacting animal welfare. Although DD lesions are painful and prone to bleeding when touched, pain resulting from DD has...

Jang, J. Y., Liang, T., Kim, M.-K. et al. 2022. A rapid and noninvasive method that extracts polymerase chain reaction-ready genomic DNA from adult zebrafish. Zebrafish 19(4), 160-164.

Genotyping usually entails analysis of the products of polymerase chain reaction (PCR) carried out with genomic DNA (gDNA) as template, and is employed for validation of mutant or transgenic organisms. For genotyping of adult zebrafish...

Kulyar, M. F.-A., Ashfaq, K., Aqib, A. I. et al. 2022. Enhanced healing activity of manuka honey and nitrofurazone composite in full-thickness burn wounds in the rabbit model. Frontiers in Veterinary Science 9, 875629.

Burns cause many significant changes in metabolism and inflammatory reactions, leading to poor regeneration in animals and humans. A list of medicines to treat burns is available in the market. But due to the high...

Mason, G. J., Lavery, J. M. 2022. What is it like to be a bass? Red herrings, fish pain and the study of animal sentience. Frontiers in Veterinary Science 9, 788289.

Debates around fishes’ ability to feel pain concern sentience: do reactions to tissue damage indicate evaluative consciousness (conscious affect), or mere nociception? Thanks to Braithwaite’s research leadership, and concerns that current practices could compromise welfare...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Manell, E., Hedenqvist, P., Jensen-Waern, M. 2021. Training pigs for oral glucose tolerance test—Six years’ experience of a refined model. Animals 11(6), 1677.

Animal models of human diseases are important in biomedical research. When using animals for scientific purposes, the 3Rs (replace, reduce, refine) should be considered. Refinement of animal models is essential to ensure best use of...

Henry, M., Jansen, H., del Rocio Amezcua, M. et al. 2021. Tail-biting in pigs: A scoping review. Animals 11(7), 2002.

Tail-biting is globally recognized as a welfare concern for commercial swine production. Substantial research has been undertaken to identify risk factors and intervention methods to decrease and understand this vice. Tail-biting appears to be multifactorial...

Hart, A., Reynolds, Z., Troxell-Smith, S. 2021. Using individual-specific conditioning to reduce stereotypic behaviours: A study on smooth dogfish Mustelus canis in captivity. Journal of Zoo and Aquarium Research, 9(3), 193-199.

Despite how frequently stereotypic behaviours are discussed in the field of animal behaviour and welfare, research on stereotypies in captive elasmobranchs is far less represented in the literature compared to studies on mammalian species. This...

Wilson-Welder, J. H., Frank, A. T. 2021. Use of food enrichment for medication delivery in large groups of sheep. Laboratory Animal Science Professional 9(3) (May/June), 40-43.

In a 2018 AALAS webinar on Sheep and Goat Analgesia, Dr. Susie Vogel, a small ruminant expert, introduced the concept of getting sheep and goats to willingly take medication by putting it in a tasty...

Lagoda, M. E., Boyle, L. A., Marchewka, J. et al. 2021. Early detection of locomotion disorders in gilts using a novel visual analogue scale; associations with chronic stress and reproduction. Animals 11(10), 2900.

Locomotion scoring is crucial for the early detection of lameness, which reduces sow welfare and performance. Our objective was to test the effectiveness of a visual analogue scale (VAS) to measure locomotory ability (OVERALL) compared...

Ferrari, P., Ulrici, A., Barbari, M. 2021. Analysis of housing risk factors for the welfare of lean and heavy pigs in a sample of European fattening farms. Animals 11(11), 3221.

Pig welfare is affected by housing conditions, the minimum requirements of which are set up by EU legislation. Animal and non-animal-based measures are useful indicators to investigate housing risk factors for pig welfare. An observational...

Kalies, A., Baumgartner, J., Beyerbach, M. et al. 2021. Interactive rooting towers and behavioural observations as strategies to reduce tail biting on conventional pig fattening farms. Animals 11(11), 3025.

Eight pens (25 pigs/pen; n = 200) provided with an interactive straw-filled rooting tower (experimental group) and five pens (25 pigs/pen; n = 125) with a stationary (fixed) tower without straw (control group) were compared...

Hakansson, F., Bolhuis, J. E., 2021. Tail-biting behaviour pre-weaning: Association between other pig-directed and general behaviour in piglets. Applied Animal Behaviour Science 241, 105385.

Tail biting in pigs is a damaging behaviour and remains an economic and welfare problem in modern pig production. Although tail biting has been extensively investigated, little is known about the behaviour in piglets. The...

Thomas, A. D., Orsel, K., Cortés, J. A. et al. 2021. Impact of digital dermatitis on feedlot cattle behaviour. Applied Animal Behaviour Science 244, 105468.

Digital dermatitis (DD) is an infectious disease affecting the bovine digital skin which can cause lameness and significantly affect animal welfare and economics. Digital dermatitis has emerged in feedlots and early identification of DD lesions...

Zemanova, M. A. 2021. Noninvasive genetic assessment is an effective wildlife research tool when compared with other approaches. Genes 12(11), 1672.

Wildlife research has been indispensable for increasing our insight into ecosystem functioning as well as for designing effective conservation measures under the currently high rates of biodiversity loss. Genetic and genomic analyses might be able...

Schodl, K., Wiesauer, L., Winckler, C. et al. 2021. Reduced stocking density and provision of straw in a rack improve pig welfare on commercial fattening farms. Frontiers in Veterinary Science 8, 656211.

The aim of this study was to investigate the impact of reduced stocking density in combination with provision of additional enrichment material on pig welfare on-farm. On three growing-finishing farms in Austria, in total 974...

D'Eath, R. B., Foister, S., Jack, M. et al. 2021. Changes in tail posture detected by a 3D machine vision system are associated with injury from damaging behaviours and ill health on commercial pig farms. PLOS ONE 16(10), e0258895.

To establish whether pig tail posture is affected by injuries and ill health, a machine vision system using 3D cameras to measure tail angle was used. Camera data from 1692 pigs in 41 production batches...

Schneider, L., Kemper, N., Spindler, B. 2020. Stereotypic behavior in fattening bulls. Animals 10(1), 40.

The occurrence of stereotypies in captive animals may indicate restrictions in animal welfare. In cattle, common stereotypies are tongue playing, manipulation of objects, or conspecifics. However, to our knowledge, the occurrence of stereotypies in fattening...