Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Colby, L. A., Nowland, M. H., Kennedy, L. H. 2019. Clinical Laboratory Animal Medicine: An Introduction (5th ed). Wiley-Blackwell, Ames, IA.

The revised fifth edition of Clinical Laboratory Animal Medicine: An Introduction is an accessible guide to basic information for conducting animal research safely and responsibly. It includes a review of the unique anatomic and physiologic...

Makowska, I. J., Weary, D. M. 2019. A good life for laboratory rodents? ILAR Journal 60(3), 373-388.

Most would agree that animals in research should be spared “unnecessary” harm, pain, or distress, and there is also growing interest in providing animals with some form of environmental enrichment. But is this the standard...

Wolfe, A. M., Rahman, M., McFadden, D. G. et al. 2018. Refinement and successful implementation of a scoring system for myxomatosis in a susceptible rabbit (Oryctolagus cuniculus) model. Comparative Medicine 68(4), 280–285.

Myxoma virus is a member of Leporipoxviridae whose tropism is tightly restricted to lagomorphs. In susceptible Oryctolagus rabbits, the virus causes a highly lethal disease known as myxomatosis, which begins as a localized infection but...

Byrd, R., Boyd, S., Buckmaster, C. 2018. Rat thunder jacket— A zen experience. Laboratory Animal Science Professional 6(3) (September), 55-57.

Germ-free rats are fairly uncommon, relative to germ-free mice, and restraining these animals safely and effectively for compound administration and blood collection can be challenging. There are many commercially available varieties of restraint devices, but...

Barker, T. H., George, R. P., Howarth, G. S. et al. 2017. Assessment of housing density, space allocation and social hierarchy of laboratory rats on behavioural measures of welfare. PLOS ONE 12(9), e0185135.

Minimum space allowances for laboratory rats are legislated based on weight and stocking rates, with the understanding that increased housing density encourages crowding stress. However, there is little evidence for these recommendations, especially when considering...

Lipták, B., Kaprinay, B., Gáspárová, Z. 2017. A rat-friendly modification of the non-invasive tail-cuff to record blood pressure. Lab Animal 46(6), 251-253.

In animal models, blood pressure measurement methods can be either invasive (direct) or non-invasive (indirect). The non-invasive alternative involves applying a tail-cuff for blood pressure measurement. Current standardized restraint methods involve confining the laboratory animal...

Pinelli, C., Leri, F., Turner, P. 2017. Long term physiologic and behavioural effects of housing density and environmental resource provision for adult male and female Sprague Dawley rats. Animals 7(6), 44.

There is considerable interest in refining laboratory rodent environments to promote animal well-being, as well as research reproducibility. Few studies have evaluated the long term impact of enhancing rodent environments with resources and additional cagemates...

Vermeer, H., Dirx-Kuijken, N., Bracke, M. 2017. Exploration feeding and higher space allocation improve welfare of growing-finishing pigs. Animals 7(5), 36.

Lack of environmental enrichment and high stocking densities in growing-finishing pigs can lead to adverse social behaviors directed to pen mates, resulting in skin lesions, lameness, and tail biting. The objective of the study was...

McMillan, J. L., Bloomsmith, M. A., Prescott, M. J. 2017. An international survey of approaches to chair restraint of nonhuman primates. Comparative Medicine 67(5), 442–451.

Specifically designed restraint chairs are the preferred method of restraint for research studies that require NHP to sit in place for sustained periods of time. In light of increasing emphasis on refinement of restraint to...

Fiedler, K. J., Parsons, R. L., Sadler, L. J. et al. 2016. Effects of stocking rate on measures of efficacy and welfare during argon gas euthanasia of weaned pigs. Animal Welfare 25(1), 83-89.

The objective of this study was to evaluate the effects of chamber stocking rate on facets of animal welfare and efficacy during euthanasia of weaned pigs (Sus scrofa domesticus) with argon gas. Two hundred and...

National Health and Medical Research Council [NHMRC]. 2016. Principles and guidelines for the care and use of non-human primates for scientific purposes. National Health and Medical Research Council: Canberra, Australia, 25 pp.

The Principles and guidelines for the care and use of non-human primates for scientific purposes is a revision of NHMRC’s Policy on the care and use of non-human primates for scientific purposes 2003 (the Policy)...

Goumon, S., Špinka, M. 2016. Emotional contagion of distress in young pigs is potentiated by previous exposure to the same stressor. Animal Cognition 19(3), 501–511.

This study tested whether emotional contagion occurs when piglets directly observe a penmate in distress (restraint) and whether there is an effect of previous experience on the response to subsequent restraint or exposure to conspecific...

Pearson, B. L., Reeder, D. M., Judge, P. G. 2015. Crowding increases salivary cortisol but not self-directed behavior in captive baboons. American Journal of Primatology 77, 462-67.

Reduced space can lead to crowding in social animals. Crowding increases the risk of agonistic interactions that, in turn, may require additional physiological defensive coping mechanisms affecting health. To determine the stress induced from increased...

Cornale, P., Macchi, E., Miretti, S. et al. 2015. Effects of stocking density and environmental enrichment on behavior and fecal corticosteroid levels of pigs under commercial farm conditions. Journal of Veterinary Behavior 10(6), 569-576.

In intensive pig farming of Western and Southern Europe, welfare concerns are still often related to barren environments and crowded conditions. Pig producers need to balance the requirements to improve welfare conditions at farm with...

Stuart, S., Robinson, E. S. J. 2015. Reducing the stress of drug administration: Implications for the 3Rs. Scientific Reports 5, 14288.

Restraint in animals is known to cause stress but is used during almost all scientific procedures in rodents, representing a major welfare and scientific issue. Administration of substances, a key part of most scientific procedures...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1–17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Bode, A. E., Barber, H. 2014. Use of vinyl nonadhesive tape as an alternative for positioning rodents in small animal imaging. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 597-598. (Abstract #P185).

Specific positioning for different imaging modalities is essential in our small animal imaging core. While we have different animal holders designed to position the animal inside the MRI, additional securing of the animal to the...

Roller, J. E., Meyers, M. 2014. Positive reinforcement training in a research setting: An introduction to sling training the Ossabaw pig. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 539. (Abstract #PS51).

Over the past year, the large animal care staff at our institution was introduced to an unfamiliar breed of pig, the Ossabaw Island pig. Not only were they tasked with adapting to this unique research...

Scollo, A., Edwards, S. A., Gottardo, F. et al. 2014. Does stocking density modify affective state in pigs as assessed by cognitive bias, behavioural and physiological parameters? Applied Animal Behaviour Science 153, 26-35.

Recent studies suggest that emotional state can affect cognitive abilities of humans and non-human animals, determining biases in information processing. Negative mental states, such as anxiety or depression, induce pessimistic judgments of ambiguous stimuli. These...

Pater, C. S. 2013. Rabbit hypnosis as a form of mild restraint: A forgotten method. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 615 (Abstract #PS42).

Rabbit hypnosis or “trancing” was a common restraint technique used for minor procedures such as: nail clipping, tooth trimming, eye exams, and subcutaneous injections. In years past the technique was originally used on pet rabbits...

Hrapkiewicz, K., Colby, L. A., Denison, P. 2013. Clinical Laboratory Animal Medicine: An Introduction (4th Ed). Wiley-Blackwell, Ames, IA.

Clinical Laboratory Animal Medicine: An Introduction, Fourth Edition offers a user-friendly guide to the unique anatomy and physiology, care, common diseases, and treatment of small mammals and nonhuman primates. Carefully designed for ease of use...

Spoolder, H. A. M., Aarnink, A. A. J., Vermeer, H. M. 2012. Effect of increasing temperature on space requirements of group housed finishing pigs. Applied Animal Behaviour Science 138(3-4), 229-239.

For groups of pigs to cope adequately with their housing conditions they need sufficient static space (occupied by the body of the pig), activity space (for movement between different functional areas and behaviours relating to...

Averós, X., Brossard, L., Dourmad, J. et al. 2010. A meta-analysis of the combined effect of housing and environmental enrichment characteristics on the behaviour and performance of pigs. Applied Animal Behaviour Science 127(3-4), 73-85.

To quantify the combined effect of housing conditions and environmental enrichment on the behaviour and performance of pigs, a meta-analysis was performed using information from 45 experiments in 42 published manuscripts. Multiple regression models were...

Moreau, E. 2010. To squeeze or not to squeeze? A Discussion on LAREF, September, 2009. Laboratory Primate Newsletter 49(2), 3-4.

The discussion was started by the following questions: "Is the squeeze-back mechanism more or less stressful than the pole and collar system for removing a macaque from his cage for an IM (intramuscular) injection?" and...

Jensen, M. B., Studnitz, M., Pedersen, L. J. 2010. The effect of type of rooting material and space allowance on exploration and abnormal behaviour in growing pigs. Applied Animal Behaviour Science 123(3-4), 87-92.

The experiment aimed to investigate the effect of type of rooting material and space allowance on explorative and abnormal behaviour in growing pigs. Thirty-six pens with partly slatted concrete floor were allocated to one of...