Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Kinally, A., Onions, L., Glenn, S. 2023. Validating the use of box training as a refinement to rabbit handling. Animal Technology and Welfare 22(1), 35–40.

In the wild, rabbits are prey animals and so the act of being picked up and handled can be extremely stressful for them. Yet, the most used method of handling laboratory rabbits is to grasp...

Kumar, P., Abubakar, A. A., Imlan, J. C. et al. 2023. Importance of knife sharpness during slaughter: Shariah and Kosher perspective and scientific validation. Animals 13(11), 1751.

Halal and kosher slaughter have given the utmost importance to the sharpness of knives during the slaughter of animals. A sharp knife of appropriate dimension (blade length) makes slaughter less painful during neck severance and...

Mauthe von Degerfeld, M., Serpieri, M., Bonaffini, G. et al. 2023. Intranasal atomization of ketamine, medetomidine and butorphanol in pet rabbits using a mucosal atomization device. Animals 13(13), 2076.

A non-invasive method of drug delivery, intranasal atomization, has shown positive results in human medicine and in some animal species. The objective of this study was to evaluate the effects of intranasal atomization, compared to...

Peruga, M., Kawala, B., Sarul, M. et al. 2023. Are currently selected laboratory animals useful in the research of how female hormones influence orthodontic biomechanics? Animals 13(4), 629.

Animal testing was and remains the only method of introducing a certain treatment and medical procedure on humans. On the other hand, animals have their rights resulting from applicable legal acts, including Directive 2010/63/EU and...

Warwick, C., Pilny, A., Steedman, C. et al. 2023. Mobile zoos and other itinerant animal handling events: Current status and recommendations for future policies. Animals 13(2), 214.

Mobile zoos are events in which non-domesticated (exotic) and domesticated species are transported to venues such as schools, hospitals, parties, and community centres, for the purposes of education, entertainment, or social and therapeutic assistance. We...

Zare, M., Heidari, E., Hosseini Choupani, S. M. et al. 2023. The recovery time between early mild stress and final acute stress affects survival rate, immunity, health, and physiology of oscar (Astronotus ocellatus). Animals 13(10), 1606.

This study investigated how the time interval between the last EMS (netting) and the acute confinement stress (AC stress) at the end of the experiment can influence growth, haematology, blood biochemistry, immunological response, antioxidant system...

Deng, J., Zhang, H., Wang, Q. et al. 2023. An optimized environmental DNA method to improve detectability of the endangered Sichuan taimen (Hucho bleekeri). Fishes 8(7), 339.

Environmental DNA (eDNA) techniques have emerged as a cost-effective and non-invasive strategy for monitoring the distribution of endangered aquatic species. Despite their numerous advantages, operational uncertainty at each step of the process represents a significant...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Du Plooy, K. J., Swan, G. E., Myburgh, J. G. et al. 2023. Electroencephalogram (EEG) assessment of brain activity before and after electrical stunning in the Nile crocodile (Crocodylus niloticus). Scientific Reports 13(1), 20250.

Electrical stunning is used to capture crocodiles to perform routine management procedures. It is essential from a welfare point that electrical stunning must cause unconsciousness in animals. However, there is no information of whether or...

McIndoe, K. S., Saunders, R., Blackwell, E. J. et al. 2022. The effect of blindfolding and swaddling on the stress response to handling in domestic rabbits. Animal Welfare 31(1), 27-36.

Stress during handling can negatively impact the welfare of an animal. Gradual habituation or systematic desensitisation can reduce this but is not always possible. Blindfolding has been shown to decrease stress indicators, including heart rate...

Molinaro, H. G., Anderson, G. S., Gruny, L. et al. 2022. Use of blood lactate in assessment of manual capture techniques of zoo-housed crocodilians. Animals 12(3), 397.

Species-specific welfare indicators are important in promoting positive welfare for zoo animals. Reptiles are a notoriously understudied group in regards to behavior, welfare needs, and husbandry requirements. Using opportunistically obtained samples, we evaluated how blood...

Buckmaster, C. L., Levesque, D., LaFollette, M. et al. 2022. Five hot topics in refinement of nonhuman primate neuroscience research. Laboratory Animal Science Professional 10(1) (January/February), 24-26.

Members of the North American 3Rs Collaborative (NA3RsC) refinement initiative have chosen to summarize developments in five hot topics of interest: 1. Tips for welfare-friendly transport, chairing, and restraint; 2. Guidance on refining food and...

Guerrero-Martin, S. M., Brill, S., Carlson, B. W. 2022. Development and implementation of a positive reinforcement training program for nonhuman primates in biomedical research. Laboratory Animal Science Professional 10(1) (January/February), 48-52.

Despite clear benefits of PRT for NHPs and biomedical research, investigators often view the investment in personnel expertise and time required to train animals as deterrents towards adopting PRT. We provide an example of how...

Bethell, E. J., Khan, W., Hussain, A. 2022. A deep transfer learning model for head pose estimation in rhesus macaques during cognitive tasks: Towards a nonrestraint noninvasive 3Rs approach. Applied Animal Behaviour Science 255, 105708.

Head orientation is a measure of attention used in behavioral psychological research with non-human primates. It is used across a broad range of disciplines and settings, from the field to the laboratory. Field methods are...

Jacob, G., Katti, H., Cherian, T. et al. 2021. A naturalistic environment to study visual cognition in unrestrained monkeys. eLife 10, e63816.

Macaque monkeys are widely used to study vision. In the traditional approach, monkeys are brought into a lab to perform visual tasks while they are restrained to obtain stable eye tracking and neural recordings. Here...

Suba-Bokodi, É., Nagy, I., Molnár, M. 2022. Changes in the stress tolerance of dwarf rabbits in animal-assisted interventions. Applied Sciences 12(14), 6979.

Background: Rabbits are common companion animals in many European countries. Rabbit-assisted interventions in primary schools are suitable for decreasing the anxiety levels of children, which may increase the education efficiency of teachers. Methods: In our...

Casey, K. M., Gore, F., Vilches-Moure, J. G. et al. 2021. Management of morbidity and mortality in a New Zealand white rabbit model of steroidinduced osteonecrosis of the femoral head. Comparative Medicine 71(1), 86-98.

Steroid-induced osteonecrosis of the femoral head (SONFH) is a condition documented in humans and animals exposed to chronic steroid administration. The rabbit has become a preferred animal model for investigating the pathogenesis and treatment of...

Chaumont, S., Freitas-de-Melo, A., Pinto-Santini, L., Menant, O. et al. 2021. Rams recognize and prefer the human who regularly brushed them. Applied Animal Behaviour Science 236, 105250.

Brushing produces a relaxing effect and improves the welfare of ewes and lambs and the human-animal relationship. Lambs gently handled during rearing are less fearful to humans in their adulthood, but there are few studies...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Martinic, G. 2021. Husbandry and healthcare of the Olive python (Liasis olivaceus). Animal Technology and Welfare 20(1), 44-50.

The article describes the care of the Olive python (Liasis olivaceus) including information on housing, feeding, handling, as well as the general health care of these animals. Some of the information presented is derived from...

Vis, A., Lammers, J. C. A. M., de Vroege, R. et al. 2021. Strategies to improve survival from surgery for heart valve implantation in sheep. Comparative Medicine 71(3), 235-239.

Sheep are a commonly used and validated model for cardiovascular research and, more specifically, for heart valve research. Implanting a heart valve on the arrested heart in sheep is complex and is often complicated by...

Haertel, A. J., Schultz, M. A., Colgin, L. M. et al. 2021. Predictors of subcutaneous injection site reactions to sustained-release buprenorphine in rhesus macaques (Macaca mulatta). JAALAS 60(3), 329-336.

Subcutaneous injection site reactions to sustained-release buprenorphine hydrochloride (Buprenorphine SR) in macaques have been reported in only a single case report. In the current study, we evaluated the incidence rate and predictors of buprenorphine SR...

Wilson-Welder, J. H., Frank, A. T. 2021. Use of food enrichment for medication delivery in large groups of sheep. Laboratory Animal Science Professional 9(3) (May/June), 40-43.

In a 2018 AALAS webinar on Sheep and Goat Analgesia, Dr. Susie Vogel, a small ruminant expert, introduced the concept of getting sheep and goats to willingly take medication by putting it in a tasty...

Archibald, W., Glynn, C. 2021. Refining cages for social housing of non-human primates on ADME studies. Animal Technology and Welfare 20(2), 172-174.

The assessment and understanding of Absorption, Distribution, Metabolism and Elimination (ADME) for new pharmaceuticals is required in regulatory submissions. Typically, ADME studies are conducted using metabolism cages designed for the single housing of animals to...

Borgmans, G., Palme, R., Sannen, A. et al. 2021. Routine handling does not lead to chronic stress in captive green anole (Anolis carolinensis). Animal Welfare 30(2), 145-154.

Routine handling has been shown to affect stress levels in a variety of animal species. This could result in a general decrease in welfare and may confound the results of scientific experiments or observations on...