Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Felgenhauer, J. L., Brune, J. E., Long, M. E. et al. 2020. Evaluation of nutritional gel supplementation in C57BL/6J mice infected with mouse-adapted Influenza A/PR/8/34 virus. Comparative Medicine 70(6), 471-486.

Mice are a common animal model for the study of influenza virus A (IAV). IAV infection causes weight loss due to anorexia and dehydration, which can result in early removal of mice from a study...

Do, J. P., Defensor, E. B., Ichim, C. V. et al. 2020. Automated and continuous monitoring of animal welfare through digital alerting. Comparative Medicine 70(4), 313-327.

A primary goal in preclinical animal research is respectful and responsible care aimed toward minimizing stress and discomfort while enhancing collection of accurate and reproducible scientific data. Researchers use hands-on clinical observations and measurements as...

Rufiange, M., Leung, V. S.Y., Simpson, K. et al. 2020. Prewarming followed by active warming is superior to passive warming in preventing hypothermia for short procedures in adult rats (Rattus norvegicus) under isoflurane anesthesia. JAALAS 59(4), 377-383.

General anesthesia is a common procedure in laboratory rats; however, it impairs thermoregulation, rapidly leading to hypothermia as warm core blood is distributed to the cooler periphery. The protective strategy of prewarming before the onset...

Pallas, B. D., Keys, D. M., Bradley, M. P. et al. 2020. Compressed paper as an alternative to corn cob bedding in mouse (Mus musculus) cages. JAALAS 59(5), 496-502.

Bedding material is a critical component of the mouse environment and affects animal wellbeing and research integrity. Corn cob (CC) bedding has been a common bedding choice in research despite several potential negative aspects of...

Cantara, S. I., Blas-Machado, U., Zhao, X. et al. 2020. Comparative effects of 1/4-inch and 1/8-inch corncob bedding on cage ammonia levels, behavior, and respiratory pathology of male C57BL/6 and 129S1/Svlm mice. JAALAS 59(6), 695-702.

Corncob is a common bedding material used in laboratory rodents, but little is known about differences in the effects of the 2 available sizes on rodent models and health. This study compared the effects of...

Grau, C., Leclercq, J., Descout, E. et al. 2019. Ethanol and a chemical from fox faeces modulate exploratory behaviour in laboratory mice. Applied Animal Behaviour Science 213, 117-123.

Mice are macrosmatic animals that use olfaction as their main source of information to increase fitness; they process predator cues to assess risk, and plants and fruit cues to find nutritional resources and assess their...

LaFollette, M. R., Swan, M. P., Smith, R. K. et al. 2019. The effects of cage color and light intensity on rat affect during heterospecific play. Applied Animal Behaviour Science 219, 104834.

Environmental enrichment provides physiological and emotional benefits to laboratory rodents. Red tinted shelters are a common enrichment found in laboratories that provide rodents with a hiding space shielded from bright light. Red tinting alters the...

Galvin, M. 2018. Refinement of tumour passage by optimisation of the tissue disaggregation protocol. Animal Technology and Welfare 17(3), 173-174 (IAT Congress 2018 Platform Presentation Abstract).

Surgical implantation of tumour pieces has been used regularly in the passage of tumour models. This involves an invasive surgical procedure, carried out under anaesthesia; ensuring mice have adequate pain relief and peri-operative care. The...

Filby, E. 2019. Give us a break! Animal Technology and Welfare 18(1), 45-48.

Literature is replete with studies on stressors to laboratory rodents; knowing the impact research and husbandry interventions, such as routine cage changing, have on rodents’ stress levels, physiology and behaviour, we hypothesised that animals recovering...

Thomson, J., Mungall, W. 2019. Using subcuticular stitching in rats to replace skin closure clips as a refinement. Animal Technology and Welfare 18(1), 75-76.

Skin closure clips are widely used within the University of Edinburgh to close incision sites for various procedures in both rats and mice. In rats the skin closure clips very often come out as a...

Stevens, C., Hawkins, P., Lovell-Badge, R. et al. 2019. Report of the 2018 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 18(2), 81-91.

The RSPCA/UFAW Rodent (and now Rabbit) Working Group has held a one-day meeting every autumn for the last 25 years, so that its members can discuss current welfare research, exchange views on welfare issues and...

White, M. 2019. Pro’s and pro’s of selective cleaning. Animal Technology and Welfare 18(2), 121-126.

The Kathleen Lonsdale Building (KLB), is a high specification, high health status animal facility that is a full IVC facility with an integral quarantine section. It houses transgenic (TG) mice, inbred, outbred and immuno-suppressed mice...

King, J. 2019. Team awesome: Why we can be proud. Animal Technology and Welfare 18(2), 127-131.

The presentation I gave at IAT Congress 2019 was based on the changes and refinements the University of Dundee, Medical School Resource Unit (MSRU) has made over the past 18 months. These changes, described in...

Yao, L., Li, Y., Qian, Z. et al. 2019. Loss of control over mild aversive events produces significant helplessness in mice. Behavioural Brain Research 376, 112173.

This article is about the importance of giving mice control over what happens to them. Most of the pathophysiology of depression are still unknown because of its numerous disease states of distinct etiology and pathogenesis...

Cowley, P. M., Roberts, C. R., Baker, A. J. 2019. Monitoring the health status of mice with bleomycin-induced lung injury by using body condition scoring. Comparative Medicine 69(2), 95–102.

Well-defined, humane endpoints aid in monitoring animal health status during disease development. Body condition scoring (BCS) is a method for assessing health status in mouse studies where wasting and death are potential endpoints. Whether BCS...

Jiron, J. M., Mendieta Calle, J. L., Castillo, E. J. et al. 2019. Comparison of isoflurane, ketamine-dexmedetomidine, and ketamine-xylazine for general anesthesia during oral procedures in rice rats (Oryzomys palustris). JAALAS 58(1), 40-49.

Rice rats (Oryzomys palustris) are an unconventional laboratory species that has been used to study photoperiodicity, periodontitis, and osteonecrosis of the jaw. Interventional procedures that require anesthesia, including oral procedures, are sometimes necessary in preclinical...

Bellin, M. A., Reitnauer, K. J., Gomez, A. M. et al. 2019. Evaluation of a synthetic bedding substrate for mice (Mus musculus). JAALAS 58(2), 154-159.

This study compared a synthetic bedding substrate (SBS), which has the potential to be a particulate-free animal bedding system, with the standard woodchip bedding. The objective was to demonstrate that the SBS is habitable for...

Taylor, J. L., Noel, P., Mickelsen, M. 2019. Evaluation of a 16-week change cycle for ventilated mouse cages. JAALAS 58(4), 443-449.

The methods and conditions for housing research mice have been the subject of many discussions and publications in recent years. At our institution, we began to explore these matters with the goal of reducing stress...

Resasco, A., Carranza Martin, A. C., Ayala, M. A. et al. 2019. Non-aversive photographic measurement method for subcutaneous tumours in nude mice. Laboratory Animals 53(4), 352–361.

We have developed a new method for the measurement of subcutaneous tumour volume which consists in taking photographs of mice in their home cages, to refine the standard method of measurement with calipers. We consider...

Jensen, T. L., Kiersgaard, M. K., Mikkelsen, L. F. et al. 2019. Fasting of male mice – Effects of time point of initiation and duration on clinical chemistry parameters and animal welfare. Laboratory Animals 53(6), 587–597.

Fasting of mice is a common procedure, which can affect the outcome of the study as well as animal welfare. In this study, we assess the effects of fasting, fasting duration and fasting initiation time...

Harikrishnan, V. S., Krishnan, L. K., Abelson, K. S. P. 2019. A novel technique to develop thoracic spinal laminectomy and a methodology to assess the functionality and welfare of the contusion spinal cord injury (SCI) rat model. PLOS ONE 14(7), e0219001.

This study reports the advantage of a novel technique employing a motorised dental burr to assist laminectomy over the conventional manual technique at T10-T11 vertebra level in a rat model of spinal cord injury. Twenty-four...

Robinson-Junker, A., O’Hara, B., Durkes, A. et al. 2019. Sleeping through anything: The effects of unpredictable disruptions on mouse sleep, healing, and affect. PLOS ONE 14(1), e0210620.

Many aspects of the laboratory environment are not tailored to the needs of rodents, which may cause stress. Unpredictable stressors can cause ulcers, prolonged pituitary-adrenal activation, and anhedonia. Similarly, pain has been demonstrated to slow...

Redaelli, V., Papa, S., Marsella, G. et al. 2019. A refinement approach in a mouse model of rehabilitation research. Analgesia strategy, reduction approach and infrared thermography in spinal cord injury. PLOS ONE 14(10), e0224337.

The principles of Refinement, Replacement and Reduction (3R’s) should be taken into account when animals must be used for scientific purpose. Here, a Reduction / Refinement approach was applied to the procedure of spinal cord...

Koski, S. K., Leino, S., Rannanpää, S. et al. 2019. Implementation of improved postoperative care decreases the mortality rate of operated mice after an abundant 6-hydroxydopamine lesion of nigrostriatal dopaminergic neurons. Scandinavian Journal of Laboratory Animal Science 45(1).

A mouse model of Parkinson’s disease with an abundant lesion of nigrostriatal dopaminergic neurons can be achieved by stereotactic injection of 6-hydroxydopamine into the medial forebrain bundle. However, postoperative mortality can be excessively high without...

Wang, X., Zhang, Y., Lu, T. et al. 2019. The effect of cage ventilation rate on the health of mice housed in Individually Ventilated Cages. Scandinavian Journal of Laboratory Animal Science 45(3).

The number of air changes per hour (ACH), an important index for individually ventilated cages (IVC), strongly affects the cage microenvironment and the health of laboratory animals. The objective of this study was to determine...