Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every three months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Links to the full text for publications that appear in open access journals or are published on the AWI website are provided under the abstract.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic. Most publications older than 2010 can only be searched by keyword. 
Zevnik, B., Jerchow, B., Buch, T. 2022. 3R measures in facilities for the production of genetically modified rodents. Lab Animal 51(6), 162-177.
Sociocultural changes in the human–animal relationship have led to increasing demands for animal welfare in biomedical research. The 3R concept is the basis for bringing this demand into practice: Replace animal experiments with alternatives where...
Spitzer, H. B., Meagher, R. K., Proudfoot, K. L. 2022. The impact of providing hiding spaces to farmed animals: A scoping review. PLoS ONE 17(11), e0277665.
Many wild animals perform hiding behaviours for a variety of reasons, such as evading predators or other conspecifics. Unlike their wild counterparts, farmed animals often live in relatively barren environments without the opportunity to hide...
Preece, C., Alghadban, S., Bouchareb, A. et al. 2021. Replacement of surgical vasectomy through the use of wild-type sterile hybrids. Lab Animal 50, 49-52.
For the production and rederivation of mouse strains, pseudopregnant female mice are used for embryo transfer and serve as surrogate mothers to support embryo development to term. Vasectomized males are commonly used to render pseudopregnancy...
Ypsilantis, P., Souftas, V., Vyza, V. et al. 2021. Magnetic resonance imaging for early pregnancy diagnosis in the laboratory rat. Laboratory Animals 55(3), 262-269.
Pregnancy diagnosis and embryo counting are important end points in reproductive, developmental biology and toxicology studies. The purpose of the present study was to assess the feasibility and efficacy of magnetic resonance imaging (MRI) for...
Brogan, E., Kirchain, S. 2021. When to wean? A visual guide to Black, White, and Agouti mouse pup growth P14 – P28. Laboratory Animal Science Professional 9(3) (May/June), 46-48.
Laboratory mouse pups are commonly weaned between postnatal day 21–28. Utilization of an exact wean date postpartum is a concrete metric for mouse colony management, but variation can result such as: developmental differences among genetically...
Ratuski, A. S., Weary, D. M. 2021. A break from the pups: The effects of loft access on the welfare of lactating laboratory rats. PLoS ONE 16(6), e0253020.
Rats (Rattus norvegicus) bred for research are typically confined with their litters until weaning, but will spend time away from pups when given the opportunity. We aimed to assess how dam welfare is affected by...
Brajon, S., Morello, G. M., Capas-Peneda, S. et al. 2021. All the pups we cannot see: Cannibalism masks perinatal death in laboratory mouse breeding but infanticide is rare. Animals 11(8), 2327.
Perinatal mortality is a major issue in laboratory mouse breeding. We compared a counting method using daily checks (DAILY_CHECK) with a method combining daily checks with detailed video analyses to detect cannibalisms (VIDEO_TRACK) for estimating...
Grims, C., Jacobson, C., Hedenqvist, P. 2021. Are female mice dehydrated during peak lactation? Effect of water and gel supplement on hydration parameters and water consumption in two strains of mice. Scandinavian Journal of Laboratory Animal Science 47(3), 16-24.
Mice (Mus musculus) have a high basal rate of metabolism which increases during pregnancy and lactation. During peak lactation, water intake amounts to up to 65 % of the bodyweight per day. Providing water in...
Araújo Tavares, G., Cavalcanti do Amaral Almeida, L., Araújo de Souza, J. et al. 2020. Early weaning disrupts feeding patterns in female juvenile rats through 5HT-system modulations. Behavioural Processes 170, 103981.
Convergent evidence in literature shows that rapid disruption of maternal care and breastfeeding due to an early weaning protocol changes the development of several neurobehavioral patterns in rodents, including the circadian pattern of feeding. The...
Morello, G. M., Hultgren, J., Capas-Peneda, S. et al. 2020. High laboratory mouse pre-weaning mortality associated with litter overlap, advanced dam age, small and large litters. PLoS ONE 15(8): e0236290.
High and variable pre-weaning mortality is a persistent problem in laboratory mouse breeding. Assuming a modest 15% mortality rate across mouse strains, means that approximately 1 million more pups are produced yearly in the EU...
Bailoo, J. D., Voelkl, B., Varholick, J. et al. 2020. Effects of weaning age and housing conditions on phenotypic differences in mice. Scientific Reports 10, 11684.
Poor reproducibility is considered a serious problem in laboratory animal research, with important scientific, economic, and ethical implications. One possible source of conflicting findings in laboratory animal research are environmental differences between animal facilities combined...
Henderson, S. 2020. Development of a sifting cage change method for rats to improve welfare. Animal Technology and Welfare 19(2), 145-148.
This poster describes the development of a sifting cage change method for rats to improve welfare. I came up with the idea after seeing how skittish and stressed the rats in my unit were and...
Hoskins, S., Brown, J. 2020. Oestrus checking – increasing productivity and embracing the 3R’s. Animal Technology and Welfare 19(2), 159-161.
Much like the menstrual cycle in humans, mice also have a cycle where the eggs ripen, ovulation takes place, the females come into heat and are receptive to mate with the male; this occurs over...
Carpenter, K. C., Thurston, S. E., Hoenerhoff, M. J. et al. 2020. Effects of trio and pair breeding of mice on environmental parameters and nasal pathology and their implications for cage change frequency. JAALAS 59(3), 288–297.
According to the Guide, cage change frequencies must be considered when cage density requirements are exceeded. We monitored ammonia, carbon dioxide, cage wetness, health status, and breeding parameters of trio and pair breeding cages containing...
Larson, M. A. 2020. Alternatives to shipping live mice. Laboratory Animal Science Professional 8(5) (September/October), 52-54.
Many in the lab animal field are familiar with shipping animals from vendor to investigator, from investigator to vendor, and from investigator to investigator. Sharing mouse models represents being good stewards of our animal resources...
Munari, C., Ponzio, P., Macchi, E. et al. 2020. A multifactorial evaluation of different reproductive rhythms and housing systems for improving welfare in rabbit does. Applied Animal Behaviour Science 230, 105047.
The most widespread reproductive rhythm practiced in rabbit farming is based on artificial insemination (AI) performed at around 11 days pospartum. This approach results in high production rates, but requires high yearly replacement of animals...
Hopper, L. M., Fernandez‐Duque, E., Williams, L. E. 2019. Testing the weekend effect hypothesis: Time of day and lunar phase better predict the timing of births in laboratory‐housed primates than day of week. American Journal of Primatology 81(7), e23026.
The weekend effect hypothesis proposes that captive primates are more likely to give birth during times of low disturbance and reduced staff activity. The hypothesis specifically predicts that laboratory‐housed primates will be more likely to...
Brajon, S., Morello, G. M., Teixeira, M. S. et al. 2019. Social environment as a cause of litter loss in laboratory mouse: A behavioural study. Applied Animal Behaviour Science 218, 104827.
Perinatal mortality is a widespread problem in laboratory mouse breeding and is often manifested by the loss of the entire litter within the first days of life. High mortality is an animal health and welfare...
Newman, S., Woodley, S. 2019. Time’s up for tick-over colonies… Do we now need to maintain so many GA mouse lines? Animal Technology and Welfare 17(3), 155-157.
The practice of continually breeding lines to maintain them as a live resource either in-between studies or indefinitely “just in case” is common practice in many animal facilities. This process of “ticking over” colonies has...
King, J. 2018. Report of the Enrichment; Awareness and Uptake Workshop 2018 on 26th June at College Court, Leicester. Animal Technology and Wefare 17(3), 163-167. [Meeting Report]
The point of the session was to have a collaborative discussion about environmental enrichment. The organisers wanted to know people’s experiences with enrichment, the barriers they have faced, if they have overcome any, and also...
Kemp, K. 2018. Ultrasound to UltraSee: The use of ultrasound to determine pregnancy in mice. Animal Technology and Welfare 17(3), 193-195 (IAT Congress 2018 Poster Presentation).
In March 2017 MRC Ares bought an ultrasound machine to assist in determining pregnancy in timed mating mice. Prior to this, visual checks or palpation would be used to confirm pregnancy. There were limitations with...
Travers, A., Thomson, J., Sharp, M. 2019. Refining mouse re-derivation by using in vitro fertilisation (IVF) with fresh or frozen sperm as opposed to embryos. Animal Technology and Welfare 18(1), 73-74.
To attempt to reduce, refine and replace, we have employed a several new approaches to rederive mouse strains. By using in vitro fertilisation (IVF) with fresh or frozen sperm we can reduce the timeframe and...
Stevens, C., Hawkins, P., Lovell-Badge, R. et al. 2019. Report of the 2018 RSPCA/UFAW Rodent and Rabbit Welfare Group meeting. Animal Technology and Welfare 18(2), 81-91.
The RSPCA/UFAW Rodent (and now Rabbit) Working Group has held a one-day meeting every autumn for the last 25 years, so that its members can discuss current welfare research, exchange views on welfare issues and...
King, J. 2019. Team awesome: Why we can be proud. Animal Technology and Welfare 18(2), 127-131.
The presentation I gave at IAT Congress 2019 was based on the changes and refinements the University of Dundee, Medical School Resource Unit (MSRU) has made over the past 18 months. These changes, described in...
Leidinger, C. S., Thöne-Reineke, C., Baumgart, N. et al. 2019. Environmental enrichment prevents pup mortality in laboratory mice. Laboratory Animals 53(1), 53–62.
Early death of mouse pups is a commonly known problem in breeding mice colonies, which is still often regarded as ‘normal’ or is even overlooked due to the counting procedures applied. As reduced breeding performance...

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